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Prok2 prokineticin 2 [ Mus musculus (house mouse) ]

Gene ID: 50501, updated on 5-Mar-2024

Summary

Official Symbol
Prok2provided by MGI
Official Full Name
prokineticin 2provided by MGI
Primary source
MGI:MGI:1354178
See related
Ensembl:ENSMUSG00000030069 AllianceGenome:MGI:1354178
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Bv8; PK2; Prok1
Summary
Predicted to enable G protein-coupled receptor binding activity. Acts upstream of or within circadian rhythm. Predicted to be located in extracellular region. Is expressed in embryo; ovary; prostate gland; and testis. Human ortholog(s) of this gene implicated in hypogonadotropic hypogonadism 4 with or without anosmia. Orthologous to human PROK2 (prokineticin 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward testis adult (RPKM 10.4) See more
Orthologs
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Genomic context

Location:
6 D3; 6 46.29 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (99687833..99703368, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (99711299..99726392, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4E member 3 Neighboring gene predicted gene, 52869 Neighboring gene G protein-coupled receptor 27 Neighboring gene predicted gene, 26748 Neighboring gene basic transcription factor 3, pseudogene 6

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables G protein-coupled receptor binding TAS
Traceable Author Statement
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
prokineticin-2
Names
Bombina variegata 8 kD protein
Bombina variegata 8kDa protein
Bv 8 homolog (Bombina variegata)
prokineticin 1
protein Bv8 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001037539.3NP_001032628.1  prokineticin-2 isoform 2 precursor

    See identical proteins and their annotated locations for NP_001032628.1

    Status: VALIDATED

    Source sequence(s)
    AC122929
    Consensus CDS
    CCDS20388.1
    UniProtKB/Swiss-Prot
    Q9QXU7
    Related
    ENSMUSP00000098678.5, ENSMUST00000101120.11
    Conserved Domains (1) summary
    pfam06607
    Location:23104
    Prokineticin; Prokineticin
  2. NM_001170419.2NP_001163890.1  prokineticin-2 isoform 3 precursor

    See identical proteins and their annotated locations for NP_001163890.1

    Status: VALIDATED

    Source sequence(s)
    AC122929
    Consensus CDS
    CCDS51864.1
    UniProtKB/TrEMBL
    G3X8R6
    Related
    ENSMUSP00000008273.7, ENSMUST00000008273.8
    Conserved Domains (1) summary
    pfam06607
    Location:3262
    Prokineticin; Prokineticin
  3. NM_001401499.1NP_001388428.1  prokineticin-2 isoform 4 precursor

    Status: VALIDATED

    Source sequence(s)
    AC122929
    Related
    ENSMUSP00000144760.2, ENSMUST00000203738.2
  4. NM_015768.3NP_056583.1  prokineticin-2 isoform 1 precursor

    See identical proteins and their annotated locations for NP_056583.1

    Status: VALIDATED

    Source sequence(s)
    AC122929
    Consensus CDS
    CCDS20389.1
    UniProtKB/Swiss-Prot
    B7ZMX7, Q9QXU5, Q9QXU6, Q9QXU7
    UniProtKB/TrEMBL
    Q14AB2
    Related
    ENSMUSP00000032152.9, ENSMUST00000032152.14
    Conserved Domains (1) summary
    pfam06607
    Location:23125
    Prokineticin; Prokineticin

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    99687833..99703368 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)