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Fbxo16 F-box protein 16 [ Mus musculus (house mouse) ]

Gene ID: 50759, updated on 23-Jun-2021

Summary

Official Symbol
Fbxo16provided by MGI
Official Full Name
F-box protein 16provided by MGI
Primary source
MGI:MGI:1354706
See related
Ensembl:ENSMUSG00000034532
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Fbx16; 4932435C24Rik
Expression
Broad expression in CNS E14 (RPKM 1.8), whole brain E14.5 (RPKM 1.7) and 15 other tissues See more
Orthologs
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Genomic context

See Fbxo16 in Genome Data Viewer
Location:
14; 14 D1
Exon count:
9
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (65504067..65561422)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (65266618..65323973)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 14 NC_000080.5 (65885538..65940339)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene frizzled class receptor 3 Neighboring gene predicted gene 9086 Neighboring gene predicted gene, 52141 Neighboring gene predicted gene, 41178 Neighboring gene predicted gene, 48449 Neighboring gene zinc finger protein 395 Neighboring gene prepronociceptin

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC144594

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001360381.1NP_001347310.1  F-box only protein 16 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AK164657, BC086690
  2. NM_001360383.1NP_001347312.1  F-box only protein 16 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AK164657, BC086690
    Consensus CDS
    CCDS88689.1
    Related
    ENSMUSP00000153094.2, ENSMUST00000226005.2
    Conserved Domains (1) summary
    pfam12937
    Location:92129
    F-box-like; F-box-like
  3. NM_015795.2NP_056610.1  F-box only protein 16 isoform 1

    See identical proteins and their annotated locations for NP_056610.1

    Status: VALIDATED

    Source sequence(s)
    AK164657, BC086690
    Consensus CDS
    CCDS36956.1
    UniProtKB/Swiss-Prot
    Q9QZM9
    UniProtKB/TrEMBL
    Q14BG9
    Related
    ENSMUSP00000153015.2, ENSMUST00000224629.2
    Conserved Domains (1) summary
    pfam12937
    Location:92135
    F-box-like; F-box-like

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    65504067..65561422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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