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Klrg1 killer cell lectin-like receptor subfamily G, member 1 [ Mus musculus (house mouse) ]

Gene ID: 50928, updated on 23-Jun-2021

Summary

Official Symbol
Klrg1provided by MGI
Official Full Name
killer cell lectin-like receptor subfamily G, member 1provided by MGI
Primary source
MGI:MGI:1355294
See related
Ensembl:ENSMUSG00000030114
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MAFA; 2F1-A; 2F1-Ag; MAFA-L
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Klrg1 in Genome Data Viewer
Location:
6 F1; 6 57.52 cM
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (122247555..122259792, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (122270596..122282833, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (122220614..122232851, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene murinoglobulin pseudogene Neighboring gene murinoglobulin, pseudogene 1 Neighboring gene predicted gene, 46974 Neighboring gene predicted gene, 53340 Neighboring gene predicted gene 6637

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (3)  1 citation
  • Chemically induced (ENU) (1) 

General gene information

Markers

Homology

Clone Names

  • MGC123930

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables carbohydrate binding ISO
Inferred from Sequence Orthology
more info
 
enables carbohydrate binding TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cell surface receptor signaling pathway TAS
Traceable Author Statement
more info
PubMed 
acts_upstream_of_or_within immune system process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within innate immune response IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane TAS
Traceable Author Statement
more info
 

General protein information

Preferred Names
killer cell lectin-like receptor subfamily G member 1
Names
mast cell function-associated antigen 2F1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_016970.1NP_058666.1  killer cell lectin-like receptor subfamily G member 1

    See identical proteins and their annotated locations for NP_058666.1

    Status: PROVISIONAL

    Source sequence(s)
    AF097357
    Consensus CDS
    CCDS20492.1
    UniProtKB/Swiss-Prot
    O88713
    Related
    ENSMUSP00000032207.9, ENSMUST00000032207.9
    Conserved Domains (1) summary
    cd03593
    Location:75185
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    122247555..122259792 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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