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Mcrs1 microspherule protein 1 [ Mus musculus (house mouse) ]

Gene ID: 51812, updated on 23-Jun-2021

Summary

Official Symbol
Mcrs1provided by MGI
Official Full Name
microspherule protein 1provided by MGI
Primary source
MGI:MGI:1858420
See related
Ensembl:ENSMUSG00000037570
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
P7; MSP; P78; ICP2; MSP58; C78274; ICP22BP
Expression
Ubiquitous expression in whole brain E14.5 (RPKM 38.4), testis adult (RPKM 37.4) and 28 other tissues See more
Orthologs
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Genomic context

See Mcrs1 in Genome Data Viewer
Location:
15; 15 F1
Exon count:
15
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (99140698..99149842, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (99242817..99251961, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (99073248..99082392, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L35a-like Neighboring gene spermatogenesis associated, serine-rich 2 Neighboring gene predicted gene, 25183 Neighboring gene predicted gene, 46538 Neighboring gene potassium voltage-gated channel, subfamily H (eag-related), member 3 Neighboring gene RIKEN cDNA 1700120C14 gene Neighboring gene predicted gene, 25999 Neighboring gene family with sequence similarity 186, member B Neighboring gene pre-mRNA processing factor 40B

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC103140, MGC117915

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G-quadruplex RNA binding ISO
Inferred from Sequence Orthology
more info
 
enables poly(G) binding ISO
Inferred from Sequence Orthology
more info
 
enables poly(U) RNA binding ISO
Inferred from Sequence Orthology
more info
 
enables telomerase inhibitor activity ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of Ino80 complex ISO
Inferred from Sequence Orthology
more info
 
part_of MLL1 complex ISO
Inferred from Sequence Orthology
more info
 
part_of NSL complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
part_of histone acetyltransferase complex ISO
Inferred from Sequence Orthology
more info
 
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
microspherule protein 1
Names
58 kDa microspherule protein
nucleolar protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001164156.1NP_001157628.1  microspherule protein 1 isoform 2

    See identical proteins and their annotated locations for NP_001157628.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an alternate exon in the 5' coding region and uses a downstream start codon, compared to variant 1. Isoform 2 has a shorter N-terminus, compared to isoform 1.
    Source sequence(s)
    AK167242, BC085099, CN724575
    Consensus CDS
    CCDS49728.1
    UniProtKB/Swiss-Prot
    Q99L90
    UniProtKB/TrEMBL
    Q3TJY1
    Related
    ENSMUSP00000131407.2, ENSMUST00000163506.3
    Conserved Domains (2) summary
    cd00060
    Location:332432
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam13325
    Location:121318
    MCRS_N; N-terminal region of micro-spherule protein
  2. NM_016766.3NP_058046.2  microspherule protein 1 isoform 1

    See identical proteins and their annotated locations for NP_058046.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
    Source sequence(s)
    AK158347, BC085099, CN724575
    Consensus CDS
    CCDS37199.1
    UniProtKB/Swiss-Prot
    Q99L90
    UniProtKB/TrEMBL
    Q3TYU7
    Related
    ENSMUSP00000043901.10, ENSMUST00000041190.17
    Conserved Domains (2) summary
    cd00060
    Location:345445
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam13325
    Location:134331
    MCRS_N; N-terminal region of micro-spherule protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    99140698..99149842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030248640.2XP_030104500.1  microspherule protein 1 isoform X1

    Conserved Domains (2) summary
    cd00060
    Location:345445
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    pfam13325
    Location:134331
    MCRS_N; N-terminal region of micro-spherule protein
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