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DIDO1 death inducer-obliterator 1 [ Bos taurus (cattle) ]

Gene ID: 519826, updated on 5-Mar-2024

Summary

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Official Symbol
DIDO1provided by VGNC
Official Full Name
death inducer-obliterator 1provided by VGNC
Primary source
VGNC:VGNC:28064
See related
Ensembl:ENSBTAG00000006002
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See DIDO1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (54471038..54521932)

Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix family member e23 Neighboring gene solute carrier family 17 member 9 Neighboring gene GID complex subunit 8 homolog Neighboring gene transcription factor like 5 Neighboring gene collagen type IX alpha 3 chain Neighboring gene opioid growth factor receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC137821

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
death-inducer obliterator 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    54471038..54521932
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025001117.2 → XP_024856885.1  death-inducer obliterator 1 isoform X1

    Conserved Domains (7) summary
    smart00510
    Location:681 → 782
    TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
    cd15639
    Location:272 → 325
    PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
    pfam07744
    Location:1056 → 1206
    SPOC; SPOC domain
    cl01090
    Location:1476 → 1526
    SlyX
    cl25887
    Location:2095 → 2145
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cl26267
    Location:166 → 328
    ING; Inhibitor of growth proteins N-terminal histone-binding
    cl26386
    Location:1561 → 1999
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III

  2. XM_025001116.2 → XP_024856884.1  death-inducer obliterator 1 isoform X1

    Conserved Domains (7) summary
    smart00510
    Location:681 → 782
    TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
    cd15639
    Location:272 → 325
    PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
    pfam07744
    Location:1056 → 1206
    SPOC; SPOC domain
    cl01090
    Location:1476 → 1526
    SlyX
    cl25887
    Location:2095 → 2145
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cl26267
    Location:166 → 328
    ING; Inhibitor of growth proteins N-terminal histone-binding
    cl26386
    Location:1561 → 1999
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III

  3. XM_059892975.1 → XP_059748958.1  death-inducer obliterator 1 isoform X1

  4. XM_015474242.3 → XP_015329728.2  death-inducer obliterator 1 isoform X2

    UniProtKB/TrEMBL
    E1BCR2
    Related
    ENSBTAP00000007879.6, ENSBTAT00000007879.7
    Conserved Domains (7) summary
    smart00510
    Location:674 → 775
    TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
    cd15639
    Location:265 → 318
    PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
    pfam07744
    Location:1049 → 1199
    SPOC; SPOC domain
    cl01090
    Location:1469 → 1519
    SlyX
    cl25887
    Location:2088 → 2138
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cl26267
    Location:159 → 321
    ING; Inhibitor of growth proteins N-terminal histone-binding
    cl26386
    Location:1554 → 1992
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III

  5. XM_010811602.4 → XP_010809904.2  death-inducer obliterator 1 isoform X1

    Conserved Domains (7) summary
    smart00510
    Location:681 → 782
    TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
    cd15639
    Location:272 → 325
    PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
    pfam07744
    Location:1056 → 1206
    SPOC; SPOC domain
    cl01090
    Location:1476 → 1526
    SlyX
    cl25887
    Location:2095 → 2145
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cl26267
    Location:166 → 328
    ING; Inhibitor of growth proteins N-terminal histone-binding
    cl26386
    Location:1561 → 1999
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III

  6. XM_015474243.3 → XP_015329729.2  death-inducer obliterator 1 isoform X2

    UniProtKB/TrEMBL
    E1BCR2
    Conserved Domains (7) summary
    smart00510
    Location:674 → 775
    TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
    cd15639
    Location:265 → 318
    PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
    pfam07744
    Location:1049 → 1199
    SPOC; SPOC domain
    cl01090
    Location:1469 → 1519
    SlyX
    cl25887
    Location:2088 → 2138
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cl26267
    Location:159 → 321
    ING; Inhibitor of growth proteins N-terminal histone-binding
    cl26386
    Location:1554 → 1992
    DNA_pol3_gamma3; DNA polymerase III subunits gamma and tau domain III

  7. XM_059892977.1 → XP_059748960.1  death-inducer obliterator 1 isoform X1

  8. XM_059892976.1 → XP_059748959.1  death-inducer obliterator 1 isoform X1

  9. XM_059892978.1 → XP_059748961.1  death-inducer obliterator 1 isoform X1

  10. XM_059892979.1 → XP_059748962.1  death-inducer obliterator 1 isoform X2

    UniProtKB/TrEMBL
    E1BCR2

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001075794.1: Suppressed sequence

    Description
    NM_001075794.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: DIDO1 (GeneID:11083).
Nucleotide Protein Strain
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