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ESYT1 extended synaptotagmin 1 [ Bos taurus (cattle) ]

Gene ID: 520669, updated on 5-Mar-2024

Summary

Official Symbol
ESYT1provided by VGNC
Official Full Name
extended synaptotagmin 1provided by VGNC
Primary source
VGNC:VGNC:28613
See related
BGD:BT17390; Ensembl:ENSBTAG00000009543
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
FAM62A
Orthologs
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Genomic context

Location:
chromosome: 5
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (57179944..57194004, complement)

Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene myosin light chain 6 Neighboring gene myosin light chain 6B Neighboring gene uncharacterized LOC101903253 Neighboring gene zinc finger CCCH-type containing 10 Neighboring gene proliferation-associated 2G4 Neighboring gene uncharacterized LOC132345300 Neighboring gene erb-b2 receptor tyrosine kinase 3

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

General gene information

Markers

Clone Names

  • MGC139353

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum-plasma membrane tethering IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
extended synaptotagmin-1
Names
family with sequence similarity 62 (C2 domain containing), member A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001077943.1NP_001071411.1  extended synaptotagmin-1

    See identical proteins and their annotated locations for NP_001071411.1

    Status: PROVISIONAL

    Source sequence(s)
    BC126509
    UniProtKB/TrEMBL
    A0JN43, F1N785
    Related
    ENSBTAP00000041673.4, ENSBTAT00000044160.5
    Conserved Domains (4) summary
    cd04030
    Location:9731098
    C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
    cd04050
    Location:483586
    C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
    cd08391
    Location:651769
    C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
    pfam17047
    Location:139317
    SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    57179944..57194004 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)