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ZNF354C zinc finger protein 354C [ Bos taurus (cattle) ]

Gene ID: 523334, updated on 5-Mar-2024

Summary

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Official Symbol
ZNF354Cprovided by VGNC
Official Full Name
zinc finger protein 354Cprovided by VGNC
Primary source
VGNC:VGNC:37256
See related
BGD:BT29857; Ensembl:ENSBTAG00000002281
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (2279190..2319461, complement)

Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-11986 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 2 Neighboring gene U2 spliceosomal RNA Neighboring gene zinc finger protein 879 Neighboring gene uncharacterized LOC112447537 Neighboring gene 60S ribosomal protein L17 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 354C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    2279190..2319461 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024995389.2 → XP_024851157.1  zinc finger protein 354C isoform X1

    Related
    ENSBTAP00000077337.1, ENSBTAT00000087918.1
    Conserved Domains (3) summary
    smart00349
    Location:59 → 119
    KRAB; krueppel associated box
    COG5048
    Location:257 → 566
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:289 → 309
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_002688501.6 → XP_002688547.3  zinc finger protein 354C isoform X2

    Related
    ENSBTAP00000021140.7, ENSBTAT00000021140.7
    Conserved Domains (3) summary
    smart00349
    Location:14 → 74
    KRAB; krueppel associated box
    COG5048
    Location:212 → 521
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:244 → 264
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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