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TAP1 transporter 1, ATP binding cassette subfamily B member [ Bos taurus (cattle) ]

Gene ID: 524959, updated on 4-Jul-2020

Summary

Official Symbol
TAP1provided by VGNC
Official Full Name
transporter 1, ATP binding cassette subfamily B memberprovided by VGNC
Primary source
VGNC:VGNC:35598
See related
Ensembl:ENSBTAG00000008953
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See TAP1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 23 NC_037350.1 (7177596..7186556, complement)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 23 AC_000180.1 (7117862..7126817, complement)

Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)-like Neighboring gene proteasome 20S subunit beta 8 Neighboring gene proteasome 20S subunit beta 9 Neighboring gene histone H2B-like Neighboring gene uncharacterized LOC112443813

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
antigen peptide transporter 1
Names
transporter 1 ATP-binding cassette sub-family B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001098058.1NP_001091527.1  antigen peptide transporter 1

    See identical proteins and their annotated locations for NP_001091527.1

    Status: PROVISIONAL

    Source sequence(s)
    AY957499
    UniProtKB/TrEMBL
    Q32S31
    Related
    ENSBTAP00000011787.6, ENSBTAT00000011787.6
    Conserved Domains (3) summary
    TIGR00958
    Location:37739
    3a01208; Conjugate Transporter-2 (CT2) Family protein
    pfam00664
    Location:191457
    ABC_membrane; ABC transporter transmembrane region
    cl21455
    Location:491719
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037350.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    7177596..7186556 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005223252.3XP_005223309.1  antigen peptide transporter 1 isoform X1

    See identical proteins and their annotated locations for XP_005223309.1

    UniProtKB/TrEMBL
    A6QPZ6
    Related
    ENSBTAP00000045934.2, ENSBTAT00000048986.3
    Conserved Domains (3) summary
    TIGR00958
    Location:37740
    3a01208; Conjugate Transporter-2 (CT2) Family protein
    pfam00664
    Location:191458
    ABC_membrane; ABC transporter transmembrane region
    cl21455
    Location:492720
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
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