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Ccdc69 coiled-coil domain containing 69 [ Mus musculus (house mouse) ]

Gene ID: 52570, updated on 23-Jun-2021

Summary

Official Symbol
Ccdc69provided by MGI
Official Full Name
coiled-coil domain containing 69provided by MGI
Primary source
MGI:MGI:1196234
See related
Ensembl:ENSMUSG00000049588
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
D11Ertd461; D11Ertd461e; 2210021E03Rik
Expression
Broad expression in bladder adult (RPKM 8.4), thymus adult (RPKM 3.9) and 16 other tissues See more
Orthologs
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Genomic context

See Ccdc69 in Genome Data Viewer
Location:
11 B1.3; 11 32.13 cM
Exon count:
9
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (54940559..54969608, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (55049733..55078666, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (54863240..54891633, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene TNFAIP3 interacting protein 1 Neighboring gene 40S ribosomal protein S11-like Neighboring gene annexin A6 Neighboring gene predicted gene, 19911 Neighboring gene GM2 ganglioside activator protein Neighboring gene ATP synthase peripheral stalk-membrane subunit b, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables microtubule binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in spindle midzone assembly ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
colocalizes_with cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in spindle midzone ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
coiled-coil domain-containing protein 69

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177471.4NP_803422.2  coiled-coil domain-containing protein 69

    See identical proteins and their annotated locations for NP_803422.2

    Status: VALIDATED

    Source sequence(s)
    AK008760, AK079810
    Consensus CDS
    CCDS36155.1
    UniProtKB/Swiss-Prot
    Q3TCJ8
    UniProtKB/TrEMBL
    Q8CF00
    Related
    ENSMUSP00000054840.7, ENSMUST00000055040.13

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    54940559..54969608 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036156828.1XP_036012721.1  coiled-coil domain-containing protein 69 isoform X1

  2. XM_011249125.2XP_011247427.1  coiled-coil domain-containing protein 69 isoform X1

    See identical proteins and their annotated locations for XP_011247427.1

    UniProtKB/Swiss-Prot
    Q3TCJ8
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