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LMO3 LIM domain only 3 [ Bos taurus (cattle) ]

Gene ID: 532870, updated on 20-Jun-2021

Summary

Official Symbol
LMO3provided by VGNC
Official Full Name
LIM domain only 3provided by VGNC
Primary source
VGNC:VGNC:30935
See related
BGD:BT25058; Ensembl:ENSBTAG00000013541
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See LMO3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 5 NC_037332.1 (93264607..93330594)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 5 AC_000162.1 (93693961..93759946)

Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene C-terminal-binding protein 2-like Neighboring gene microsomal glutathione S-transferase 1

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Clone Names

  • MGC137301

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
LIM domain only protein 3
Names
LIM domain only 3 (rhombotin-like 2)
LMO-3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001046337.2NP_001039802.1  LIM domain only protein 3

    See identical proteins and their annotated locations for NP_001039802.1

    Status: PROVISIONAL

    Source sequence(s)
    BC112712
    UniProtKB/Swiss-Prot
    Q2KIA3
    Related
    ENSBTAP00000040639.1, ENSBTAT00000043044.2
    Conserved Domains (2) summary
    cd09388
    Location:1367
    LIM1_LMO1_LMO3; The first LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
    cd09389
    Location:77131
    LIM2_LMO1_LMO3; The second LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037332.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    93264607..93330594
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010805454.3XP_010803756.1  LIM domain only protein 3 isoform X2

    See identical proteins and their annotated locations for XP_010803756.1

    UniProtKB/Swiss-Prot
    Q2KIA3
    Conserved Domains (2) summary
    cd09388
    Location:1367
    LIM1_LMO1_LMO3; The first LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
    cd09389
    Location:77131
    LIM2_LMO1_LMO3; The second LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
  2. XM_005206982.2XP_005207039.1  LIM domain only protein 3 isoform X2

    See identical proteins and their annotated locations for XP_005207039.1

    UniProtKB/Swiss-Prot
    Q2KIA3
    Conserved Domains (2) summary
    cd09388
    Location:1367
    LIM1_LMO1_LMO3; The first LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
    cd09389
    Location:77131
    LIM2_LMO1_LMO3; The second LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
  3. XM_010805456.3XP_010803758.1  LIM domain only protein 3 isoform X2

    See identical proteins and their annotated locations for XP_010803758.1

    UniProtKB/Swiss-Prot
    Q2KIA3
    Conserved Domains (2) summary
    cd09388
    Location:1367
    LIM1_LMO1_LMO3; The first LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
    cd09389
    Location:77131
    LIM2_LMO1_LMO3; The second LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
  4. XM_005206981.4XP_005207038.1  LIM domain only protein 3 isoform X1

    See identical proteins and their annotated locations for XP_005207038.1

    Related
    ENSBTAP00000070366.1, ENSBTAT00000075529.1
    Conserved Domains (2) summary
    cd09388
    Location:2478
    LIM1_LMO1_LMO3; The first LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
    cd09389
    Location:88142
    LIM2_LMO1_LMO3; The second LIM domain of LMO1 and LMO3 (LIM domain only protein 1 and 3)
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