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Sult1d1 sulfotransferase family 1D, member 1 [ Mus musculus (house mouse) ]

Gene ID: 53315, updated on 16-Oct-2021

Summary

Official Symbol
Sult1d1provided by MGI
Official Full Name
sulfotransferase family 1D, member 1provided by MGI
Primary source
MGI:MGI:1926341
See related
Ensembl:ENSMUSG00000029273
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ST1d1; Sultn; SULT-N; AI987815; 5033411P13Rik
Expression
Biased expression in kidney adult (RPKM 10.5), large intestine adult (RPKM 5.3) and 6 other tissues See more
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Genomic context

See Sult1d1 in Genome Data Viewer
Location:
5; 5 E1
Exon count:
8
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (87702509..87716865, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (87554650..87569006, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (87983675..87998031, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene UDP glucuronosyltransferase 2 family, polypeptide A1 Neighboring gene UDP glucuronosyltransferase 2 family, polypeptide A2 Neighboring gene sulfotransferase family 1B, member 1 Neighboring gene sulfotransferase family 1E, member 1 Neighboring gene microRNA 3969

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables aryl sulfotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables aryl sulfotransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables sulfotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables sulfotransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within catecholamine metabolic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within sulfate assimilation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in sulfation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within sulfation IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
sulfotransferase 1 family member D1
Names
N-sulfotransferase
amine N-sulfotransferase
dopamine sulfotransferase Sult1d1
tyrosine-ester sulfotransferase
NP_058051.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_016771.3NP_058051.3  sulfotransferase 1 family member D1

    See identical proteins and their annotated locations for NP_058051.3

    Status: VALIDATED

    Source sequence(s)
    AI118913, AK133530, BC066190
    Consensus CDS
    CCDS39130.1
    UniProtKB/Swiss-Prot
    Q3UZZ6
    Related
    ENSMUSP00000108940.3, ENSMUST00000113314.3
    Conserved Domains (1) summary
    pfam00685
    Location:38288
    Sulfotransfer_1; Sulfotransferase domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    87702509..87716865 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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