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PVALB parvalbumin [ Bos taurus (cattle) ]

Gene ID: 538603, updated on 13-Apr-2024

Summary

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Official Symbol
PVALBprovided by VGNC
Official Full Name
parvalbuminprovided by VGNC
Primary source
VGNC:VGNC:33579
See related
BGD:BT15260; Ensembl:ENSBTAG00000019159
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
pvalb1
Orthologs
human mouse all
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Genomic context

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See PVALB in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (75176518..75196152, complement)

Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel auxiliary subunit gamma 2 Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 Neighboring gene uncharacterized LOC101906435 Neighboring gene intraflagellar transport 27 Neighboring gene endogenous retrovirus group K member 7 Env polyprotein-like Neighboring gene neutrophil cytosolic factor 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The assignment by linkage mapping of four genes from human chromosome 22 to bovine chromosome 5 and 17. Ariza F, et al. Anim Genet, 2001 Dec. PMID 11736808
  2. Food allergy to chicken meat with IgE reactivity to muscle alpha-parvalbumin. Kuehn A, et al. Allergy, 2009 Oct. PMID 19772518
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
parvalbumin alpha
Names
Ca(2+)-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076114.2 → NP_001069582.1  parvalbumin alpha

    See identical proteins and their annotated locations for NP_001069582.1

    Status: PROVISIONAL

    Source sequence(s)
    BC120184
    UniProtKB/Swiss-Prot
    Q0VCG3
    UniProtKB/TrEMBL
    C1KUF7
    Related
    ENSBTAP00000025499.3, ENSBTAT00000025499.5
    Conserved Domains (1) summary
    cd16254
    Location:9 → 109
    EFh_parvalbumin_alpha; EF-hand, calcium binding motif, found in alpha-parvalbumin

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    75176518..75196152 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010805339.4 → XP_010803641.1  parvalbumin alpha isoform X1

    See identical proteins and their annotated locations for XP_010803641.1

    UniProtKB/Swiss-Prot
    Q0VCG3
    UniProtKB/TrEMBL
    C1KUF7
    Conserved Domains (1) summary
    cd16254
    Location:9 → 109
    EFh_parvalbumin_alpha; EF-hand, calcium binding motif, found in alpha-parvalbumin

  2. XM_024991979.2 → XP_024847747.1  parvalbumin alpha isoform X1

    UniProtKB/Swiss-Prot
    Q0VCG3
    UniProtKB/TrEMBL
    C1KUF7
    Conserved Domains (1) summary
    cd16254
    Location:9 → 109
    EFh_parvalbumin_alpha; EF-hand, calcium binding motif, found in alpha-parvalbumin
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0VCG3.3 GenPept UniProtKB/Swiss-Prot:Q0VCG3

Gene LinkOut

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