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Myh13 myosin, heavy polypeptide 13, skeletal muscle [ Mus musculus (house mouse) ]

Gene ID: 544791, updated on 16-Oct-2021

Summary

Official Symbol
Myh13provided by MGI
Official Full Name
myosin, heavy polypeptide 13, skeletal muscleprovided by MGI
Primary source
MGI:MGI:1339967
See related
Ensembl:ENSMUSG00000060180
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
MyHC-eo
Expression
Biased expression in mammary gland adult (RPKM 3.6), limb E14.5 (RPKM 1.6) and 3 other tissues See more
Orthologs
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Genomic context

See Myh13 in Genome Data Viewer
Location:
11 B3; 11 40.85 cM
Exon count:
39
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (67217929..67262413)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (67327103..67371587)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (67140605..67185004)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene myosin, heavy polypeptide 4, skeletal muscle Neighboring gene nuclear encoded tRNA proline 2 (anticodon TGG) Neighboring gene myosin, heavy polypeptide 8, skeletal muscle, perinatal Neighboring gene predicted gene, 40029 Neighboring gene predicted gene, 31459 Neighboring gene growth arrest specific 7 Neighboring gene predicted gene 12301

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Process Evidence Code Pubs
acts_upstream_of_or_within cellular response to starvation IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in myofibril IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
myosin-13
Names
EO Myosin
extraocular myosin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081250.2NP_001074719.1  myosin-13

    Status: VALIDATED

    Source sequence(s)
    AL596255, BX255958
    Consensus CDS
    CCDS36185.1
    UniProtKB/TrEMBL
    B1AR69
    Related
    ENSMUSP00000080584.6, ENSMUST00000081911.12
    Conserved Domains (6) summary
    cd14923
    Location:100770
    MYSc_Myh13; class II myosin heavy chain 13, motor domain
    pfam00063
    Location:88770
    Myosin_head; Myosin head (motor domain)
    pfam01576
    Location:8501927
    Myosin_tail_1; Myosin tail
    pfam02736
    Location:3673
    Myosin_N; Myosin N-terminal SH3-like domain
    pfam07851
    Location:17441837
    TMPIT; TMPIT-like protein
    cl19219
    Location:15061582
    DUF342; Protein of unknown function (DUF342)

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    67217929..67262413
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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