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Gm5797 predicted gene 5797 [ Mus musculus (house mouse) ]

Gene ID: 545013, updated on 8-Feb-2024

Summary

Official Symbol
Gm5797provided by MGI
Official Full Name
predicted gene 5797provided by MGI
Primary source
MGI:MGI:3646487
See related
Ensembl:ENSMUSG00000072726 AllianceGenome:MGI:3646487
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EG545013
Expression
Biased expression in testis adult (RPKM 6.0), CNS E18 (RPKM 2.3) and 6 other tissues See more
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Genomic context

See Gm5797 in Genome Data Viewer
Location:
14 A2; 14 4.33 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (15137378..15145785)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (7323988..7332395, complement)

Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4933406F09 gene Neighboring gene STARR-seq mESC enhancer starr_35807 Neighboring gene STARR-seq mESC enhancer starr_35808 Neighboring gene RIKEN cDNA 4930521O11 gene Neighboring gene ribosomal protein L3 pseudogene Neighboring gene predicted gene, 41090 Neighboring gene predicted gene 3739 Neighboring gene predicted gene, 31035 Neighboring gene predicted gene 3727 Neighboring gene predicted gene, 16525 Neighboring gene esterase D/formylglutathione hydrolase pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC545013

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001025085.3NP_001020256.1  uncharacterized protein LOC545013

    See identical proteins and their annotated locations for NP_001020256.1

    Status: PREDICTED

    Source sequence(s)
    AC132423
    Consensus CDS
    CCDS49399.1
    UniProtKB/TrEMBL
    L7N254, Q5BKP9
    Related
    ENSMUSP00000098446.4, ENSMUST00000100886.4
    Conserved Domains (1) summary
    pfam04822
    Location:50125
    Takusan; Takusan

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000080.7 Reference GRCm39 C57BL/6J

    Range
    15137378..15145785
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)