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Ms4a15 membrane-spanning 4-domains, subfamily A, member 15 [ Mus musculus (house mouse) ]

Gene ID: 545279, updated on 23-Jun-2021

Summary

Official Symbol
Ms4a15provided by MGI
Official Full Name
membrane-spanning 4-domains, subfamily A, member 15provided by MGI
Primary source
MGI:MGI:3617853
See related
Ensembl:ENSMUSG00000067571
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm1286; E530011F12Rik
Expression
Biased expression in frontal lobe adult (RPKM 10.4) and large intestine adult (RPKM 0.4) See more
Orthologs
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Genomic context

See Ms4a15 in Genome Data Viewer
Location:
19; 19 A
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (10955667..10970663, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (10978303..10993299, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (11052797..11067740, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene prostaglandin D2 receptor 2 Neighboring gene coiled-coil domain containing 86 Neighboring gene membrane-spanning 4-domains, subfamily A, member 10 Neighboring gene membrane-spanning 4-domains, subfamily A, member 18 Neighboring gene predicted gene 28347

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
membrane-spanning 4-domains subfamily A member 15

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001034898.2NP_001030070.1  membrane-spanning 4-domains subfamily A member 15

    See identical proteins and their annotated locations for NP_001030070.1

    Status: PROVISIONAL

    Source sequence(s)
    AK143446
    Consensus CDS
    CCDS29594.1
    UniProtKB/Swiss-Prot
    Q3UPL6
    Related
    ENSMUSP00000085234.3, ENSMUST00000087923.4
    Conserved Domains (1) summary
    pfam04103
    Location:76198
    CD20; CD20-like family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    10955667..10970663 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006527212.4XP_006527275.1  membrane-spanning 4-domains subfamily A member 15 isoform X2

    Conserved Domains (1) summary
    pfam04103
    Location:101223
    CD20; CD20-like family
  2. XM_006527213.4XP_006527276.1  membrane-spanning 4-domains subfamily A member 15 isoform X1

    See identical proteins and their annotated locations for XP_006527276.1

    UniProtKB/TrEMBL
    B7ZWE7
    Conserved Domains (2) summary
    PHA03378
    Location:1591
    PHA03378; EBNA-3B; Provisional
    pfam04103
    Location:102224
    CD20; CD20-like family
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