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nubp1 nucleotide binding protein 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 548552, updated on 30-Sep-2021

Summary

Official Symbol
nubp1provided by Xenbase
Official Full Name
nucleotide binding protein 1provided by Xenbase
Primary source
Xenbase:XB-GENE-992726
See related
EnsemblRapid:ENSXETG00000007991
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
nbp; nbp1; nubp1-a; nubp1-b
Orthologs
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Genomic context

See nubp1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
11
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (37256355..37268961)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (30856214..30869275, complement)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene activating transcription factor 7 interacting protein 2 Neighboring gene epithelial membrane protein 2 Neighboring gene trans-golgi network vesicle protein 23 homolog A (S. cerevisiae) Neighboring gene glutamate receptor, ionotropic, N-methyl D-aspartate 2A

Genomic regions, transcripts, and products

General gene information

Homology

Clone Names

  • MGC97800

General protein information

Preferred Names
cytosolic Fe-S cluster assembly factor nubp1
Names
nucleotide binding protein 1 (MinD homolog)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001015835.1NP_001015835.1  cytosolic Fe-S cluster assembly factor nubp1

    See identical proteins and their annotated locations for NP_001015835.1

    Status: PROVISIONAL

    Source sequence(s)
    BC090123
    UniProtKB/Swiss-Prot
    Q5EB25
    Related
    ENSXETP00000017517.4, ENSXETT00000017517.5
    Conserved Domains (1) summary
    pfam10609
    Location:57307
    ParA; NUBPL iron-transfer P-loop NTPase

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    37256355..37268961
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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