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eif4e eukaryotic translation initiation factor 4E [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 548663, updated on 5-Mar-2024

Summary

Official Symbol
eif4eprovided by Xenbase
Official Full Name
eukaryotic translation initiation factor 4Eprovided by Xenbase
Primary source
Xenbase:XB-GENE-855435
See related
Ensembl:ENSXETG00000009316
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
cbp; eif4f; eIF-4E; eif4e1; eif4el1
Orthologs
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Genomic context

See eif4e in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (74892442..74910279)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (65531287..65549082)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116411445 Neighboring gene methionyl aminopeptidase 1 Neighboring gene small Cajal body-specific RNA 15 Neighboring gene tetraspanin 5 Neighboring gene RAP1, GTP-GDP dissociation stimulator 1

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within mRNA transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within translational initiation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
eukaryotic translation initiation factor 4E

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001015909.1NP_001015909.1  eukaryotic translation initiation factor 4E

    See identical proteins and their annotated locations for NP_001015909.1

    Status: PROVISIONAL

    Source sequence(s)
    CR926428
    UniProtKB/TrEMBL
    A0A6I8PZ33, Q28CE6
    Related
    ENSXETP00000061620.3, ENSXETT00000065896.3
    Conserved Domains (1) summary
    pfam01652
    Location:38194
    IF4E; Eukaryotic initiation factor 4E

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    74892442..74910279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)