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pfn2 profilin 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 548852, updated on 9-Oct-2019

Summary

Official Symbol
pfn2provided by Xenbase
Official Full Name
profilin 2provided by Xenbase
Primary source
Xenbase:XB-GENE-945004
See related
Ensembl:ENSXETG00000019862
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
pfl; d3s1319e; Profilin2; XProfilin2
Orthologs

Genomic context

See pfn2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (115124555..115141633)
102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668237.1 (22590184..22607262, complement)

Chromosome 5 - NC_030681.1Genomic Context describing neighboring genes Neighboring gene stress-associated endoplasmic reticulum protein 1 Neighboring gene TSC22 domain family member 2 Neighboring gene ring finger protein 13 Neighboring gene ankyrin repeat and ubiquitin domain containing 1

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Homology

General protein information

Preferred Names
profilin-2
Names
profilin II

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001016098.2NP_001016098.1  profilin-2

    See identical proteins and their annotated locations for NP_001016098.1

    Status: PROVISIONAL

    Source sequence(s)
    CR762150
    UniProtKB/TrEMBL
    B3DLT3
    Related
    ENSXETP00000045100.1, ENSXETT00000046429.1
    Conserved Domains (1) summary
    smart00392
    Location:2140
    PROF; Profilin

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_tropicalis_v9.1 Primary Assembly

Genomic

  1. NC_030681.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Range
    115124555..115141633
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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