polr2h polymerase (RNA) II subunit H [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: polr2hprovided by Xenbase
Official Full Name: polymerase (RNA) II subunit Hprovided by Xenbase
Primary source: Xenbase:XB-GENE-491773
See related: Ensembl:ENSXETG00000017291
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as: rpb8; rpb17; hsrpb8; rpabc3
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	5	NC_030681.2 (99527518..99530415, complement)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	5	NC_030681.1 (111439535..111442432)

Chromosome 5 - NC_030681.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables DNA-directed 5'-3' RNA polymerase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within DNA-templated transcription	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of DNA-directed RNA polymerase complex	IEA Inferred from Electronic Annotation more info
part_of RNA polymerase II, core complex	IEA Inferred from Electronic Annotation more info
located_in intracellular organelle	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: DNA-directed RNA polymerases I, II, and III subunit RPABC3

Names: polymerase (RNA) II (DNA directed) polypeptide H

NP_001016113.1

EC 2.7.7.6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001016113.2 → NP_001016113.1 DNA-directed RNA polymerases I, II, and III subunit RPABC3

Status: PROVISIONAL

Source sequence(s)

CR762104

UniProtKB/TrEMBL

A0A6I8T0M2, F7CRN2

Related

ENSXETP00000101627.1, ENSXETT00000100411.2

Conserved Domains (1) summary

pfam03870
Location:8 → 147

RNA_pol_Rpb8; RNA polymerase Rpb8