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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference UCB_Xtro_10.0 Primary Assembly
Genomic
-
NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly
- Range
-
6959006..7044526 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_012956956.3 → XP_012812410.1 POU domain, class 2, transcription factor 1 isoform X6
- UniProtKB/TrEMBL
- A0A803K3U9, A0A8J0SFM3
- Conserved Domains (3) summary
-
- smart00352
Location:259 → 332
- POU; Found in Pit-Oct-Unc transcription factors
- COG5576
Location:344 → 463
- COG5576; Homeodomain-containing transcription factor [Transcription]
- pfam00046
Location:365 → 418
- Homeobox; Homeobox domain
-
XM_012956953.3 → XP_012812407.1 POU domain, class 2, transcription factor 1 isoform X3
- UniProtKB/TrEMBL
- A0A1B8Y2Q0, A0A8J0S7M3, F7CS71
- Related
- ENSXETP00000013682.4, ENSXETT00000013682.4
- Conserved Domains (2) summary
-
- smart00352
Location:299 → 373
- POU; Found in Pit-Oct-Unc transcription factors
- pfam00046
Location:403 → 457
- Homeobox; Homeobox domain
-
XM_031895972.1 → XP_031751832.1 POU domain, class 2, transcription factor 1 isoform X2
- UniProtKB/TrEMBL
- A0A1B8Y2Q0, A0A6I8QFE3, F7CS71
- Conserved Domains (3) summary
-
- smart00352
Location:299 → 372
- POU; Found in Pit-Oct-Unc transcription factors
- COG5576
Location:384 → 503
- COG5576; Homeodomain-containing transcription factor [Transcription]
- pfam00046
Location:405 → 459
- Homeobox; Homeobox domain
-
XM_012956952.3 → XP_012812406.1 POU domain, class 2, transcription factor 1 isoform X1
- UniProtKB/TrEMBL
- A0A1B8Y2Q0, A0A6I8QFE3, F7CS71
- Related
- ENSXETP00000068316.1, ENSXETT00000072784.2
- Conserved Domains (3) summary
-
- smart00352
Location:299 → 372
- POU; Found in Pit-Oct-Unc transcription factors
- COG5576
Location:384 → 503
- COG5576; Homeodomain-containing transcription factor [Transcription]
- pfam00046
Location:405 → 459
- Homeobox; Homeobox domain
-
XM_012956954.3 → XP_012812408.1 POU domain, class 2, transcription factor 1 isoform X4
- UniProtKB/TrEMBL
- A0A6I8QK57, A0A6I8RV90
- Related
- ENSXETP00000105567.1, ENSXETT00000106834.1
- Conserved Domains (3) summary
-
- smart00352
Location:294 → 367
- POU; Found in Pit-Oct-Unc transcription factors
- COG5576
Location:379 → 498
- COG5576; Homeodomain-containing transcription factor [Transcription]
- pfam00046
Location:400 → 454
- Homeobox; Homeobox domain
-
XM_012956955.3 → XP_012812409.1 POU domain, class 2, transcription factor 1 isoform X5
See identical proteins and their annotated locations for XP_012812409.1
- UniProtKB/Swiss-Prot
-
Q28BL7
- UniProtKB/TrEMBL
-
A0A6I8QK57
- Related
- ENSXETP00000085419.2, ENSXETT00000071034.2
- Conserved Domains (2) summary
-
- smart00352
Location:294 → 368
- POU; Found in Pit-Oct-Unc transcription factors
- pfam00046
Location:398 → 452
- Homeobox; Homeobox domain
-
XM_012956957.3 → XP_012812411.1 POU domain, class 2, transcription factor 1 isoform X7
- UniProtKB/TrEMBL
- A0A803K3U9, A0A8J0SCL4
- Related
- ENSXETP00000115019.1, ENSXETT00000107419.1
- Conserved Domains (3) summary
-
- smart00352
Location:254 → 327
- POU; Found in Pit-Oct-Unc transcription factors
- COG5576
Location:339 → 458
- COG5576; Homeodomain-containing transcription factor [Transcription]
- pfam00046
Location:360 → 414
- Homeobox; Homeobox domain