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LOC5501905 growth/differentiation factor 6-A [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5501905, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5501905
Gene description
growth/differentiation factor 6-A
Locus tag
NEMVEDRAFT_v1g194892
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
Also known as
GDF5
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Genomic context

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See LOC5501905 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 11 NC_064044.1 (4768783..4771166, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001833977.1 (113424..116136, complement)

Chromosome 11 - NC_064044.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116609371 Neighboring gene epidermal retinol dehydrogenase 2 Neighboring gene graves disease carrier protein homolog Neighboring gene galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 Neighboring gene uncharacterized LOC5501385

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Maintenance of ancestral complexity and non-metazoan genes in two basal cnidarians. Technau U, et al. Trends Genet, 2005 Dec. PMID 16226338
  2. Asymmetric expression of the BMP antagonists chordin and gremlin in the sea anemone Nematostella vectensis: implications for the evolution of axial patterning. Rentzsch F, et al. Dev Biol, 2006 Aug 15. PMID 16828077

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SMAD protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
growth/differentiation factor 6-A
Names
GDF5-like protein
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064044.1 Reference jaNemVect1.1

    Range
    4768783..4771166 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001623107.3 → XP_001623157.2  growth/differentiation factor 6-A

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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