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LOC5506676 stimulator of interferon genes protein [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5506676, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5506676
Gene description
stimulator of interferon genes protein
Locus tag
NEMVEDRAFT_v1g246111
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
Also known as
STING; NvSTING
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Genomic context

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See LOC5506676 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 6 NC_064039.1 (4439843..4442071)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834217.1 (260402..262657, complement)

Chromosome 6 - NC_064039.1Genomic Context describing neighboring genes Neighboring gene protrudin Neighboring gene 4-hydroxyphenylpyruvate dioxygenase-like protein Neighboring gene uncharacterized LOC116615998 Neighboring gene uncharacterized LOC116614268 Neighboring gene melatonin receptor type 1B-B Neighboring gene TP53-binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2',3'-cyclic GMP-AMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclic-di-GMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of type I interferon production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reticulophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stimulator of interferon genes protein
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064039.1 Reference jaNemVect1.1

    Range
    4439843..4442071
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001627335.3 → XP_001627385.2  stimulator of interferon genes protein

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A7SLZ2.1 GenPept UniProtKB/Swiss-Prot:A7SLZ2

Gene LinkOut

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