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LOC5507857 hapless 2 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5507857, updated on 25-Jun-2022

Summary

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Gene symbol
LOC5507857
Gene description
hapless 2
Locus tag
NEMVEDRAFT_v1g212848
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
Also known as
GCS1; HAP2
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Genomic context

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Location:
chromosome: 7
Exon count:
17
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 7 NC_064040.1 (13981304..14001714, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834250.1 (74059..86580, complement)

Chromosome 7 - NC_064040.1Genomic Context describing neighboring genes Neighboring gene fasciculation and elongation protein zeta-1 Neighboring gene uncharacterized LOC5507873 Neighboring gene uncharacterized LOC116615021 Neighboring gene ribosome quality control complex subunit NEMF Neighboring gene uncharacterized LOC5507878 Neighboring gene uncharacterized LOC125568337

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evidence for participation of GCS1 in fertilization of the starlet sea anemone Nematostella vectensis: implication of a common mechanism of sperm-egg fusion in plants and animals. Ebchuqin E, et al. Biochem Biophys Res Commun, 2014 Sep 5. PMID 25111819

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. study investigated role of GCS1 in animal fertilization; findings showed the GCS1 gene is expressed in the testis and GCS1 protein exists in sperm; results indicate that sperm GCS1 plays a pivotal role in fertilization, most probably in sperm-egg fusion
    Title: Evidence for participation of GCS1 in fertilization of the starlet sea anemone Nematostella vectensis: implication of a common mechanism of sperm-egg fusion in plants and animals.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
hapless 2
Names
Generative cell specific 1
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064040.1 Reference jaNemVect1.1

    Range
    13981304..14001714 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001628445.3 → XP_001628495.1  hapless 2

    See identical proteins and their annotated locations for XP_001628495.1

    UniProtKB/Swiss-Prot
    A7SIM4
    Conserved Domains (1) summary
    pfam10699
    Location:50 → 544
    HAP2-GCS1; Male gamete fusion factor
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A7SIM4.1 GenPept UniProtKB/Swiss-Prot:A7SIM4

Gene LinkOut

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