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LOC5509288 general transcription factor IIE subunit 1 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5509288, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5509288
Gene description
general transcription factor IIE subunit 1
Locus tag
NEMVEDRAFT_v1g115691
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 4 NC_064037.1 (6178599..6180252)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834281.1 (102906..104821, complement)

Chromosome 4 - NC_064037.1Genomic Context describing neighboring genes Neighboring gene N-lysine methyltransferase SETD6 Neighboring gene kelch-like protein diablo Neighboring gene lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog Neighboring gene galaxin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription open complex formation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIE subunit 1
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064037.1 Reference jaNemVect1.1

    Range
    6178599..6180252
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001629798.3 → XP_001629848.2  general transcription factor IIE subunit 1

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases