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LOC5514226 general transcription factor IIH subunit 2 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5514226, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5514226
Gene description
general transcription factor IIH subunit 2
Locus tag
NEMVEDRAFT_v1g101079
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 3 NC_064036.1 (16581246..16594150, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834355.1 (353495..363010, complement)

Chromosome 3 - NC_064036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC5514224 Neighboring gene uncharacterized LOC116619227 Neighboring gene protein ELYS Neighboring gene uncharacterized LOC116619219 Neighboring gene tetraspanin-5 Neighboring gene tetraspanin-5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIH core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIH subunit 2
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064036.1 Reference jaNemVect1.1

    Range
    16581246..16594150 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032383762.2 → XP_032239653.2  general transcription factor IIH subunit 2

Nucleotide Protein
Heading Accession and Version

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