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LOC5515538 uridine phosphorylase 2 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5515538, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5515538
Gene description
uridine phosphorylase 2
Locus tag
NEMVEDRAFT_v1g241497
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 2 NC_064035.1 (2809801..2814909)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834368.1 (701896..708052)

Chromosome 2 - NC_064035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC5515582 Neighboring gene coiled-coil domain-containing protein 103 Neighboring gene leucine-rich repeat flightless-interacting protein 2 Neighboring gene transmembrane ascorbate-dependent reductase CYB561

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables uridine phosphorylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in uridine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uridine phosphorylase 2
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064035.1 Reference jaNemVect1.1

    Range
    2809801..2814909
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001635599.3 → XP_001635649.1  uridine phosphorylase 2 isoform X1

    See identical proteins and their annotated locations for XP_001635649.1

    UniProtKB/TrEMBL
    A7RY71
    Conserved Domains (1) summary
    cl00303
    Location:8 → 290
    PNP_UDP_1; Phosphorylase superfamily

  2. XM_048723264.1 → XP_048579221.1  uridine phosphorylase 2 isoform X3

  3. XM_048723263.1 → XP_048579220.1  uridine phosphorylase 2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases