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LOC5521453 uridine 5'-monophosphate synthase [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 5521453, updated on 30-Nov-2023

Summary

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Gene symbol
LOC5521453
Gene description
uridine 5'-monophosphate synthase
Locus tag
NEMVEDRAFT_v1g81583
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
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Genomic context

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Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 6 NC_064039.1 (6274656..6278439)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001834410.1 (1715257..1717100)

Chromosome 6 - NC_064039.1Genomic Context describing neighboring genes Neighboring gene signal peptide, CUB and EGF-like domain-containing protein 2 Neighboring gene putative glutathione-specific gamma-glutamylcyclotransferase 2 Neighboring gene cyclin-J Neighboring gene major vault protein Neighboring gene uncharacterized LOC116604406 Neighboring gene transcription initiation factor IIB-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables orotate phosphoribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables orotidine-5'-phosphate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 'de novo' UMP biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in 'de novo' pyrimidine nucleobase biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uridine 5'-monophosphate synthase
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064039.1 Reference jaNemVect1.1

    Range
    6274656..6278439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048729057.1 → XP_048585014.1  uridine 5'-monophosphate synthase isoform X1

  2. XM_001641188.3 → XP_001641238.3  uridine 5'-monophosphate synthase isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases