U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

slc2a15b solute carrier family 2 member 15b [ Danio rerio (zebrafish) ]

Gene ID: 552924, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
slc2a15bprovided by ZNC
Official Full Name
solute carrier family 2 member 15bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-050508-1
See related
Ensembl:ENSDARG00000053269 AllianceGenome:ZFIN:ZDB-GENE-050508-1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:113085
Summary
Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within carbohydrate transport and transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in several structures, including heart; integument; kidney; liver; and muscle. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (31573245..31598417)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (30789322..30865999)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110439710 Neighboring gene ladybird homeobox 1b Neighboring gene fibroblast growth factor 8b Neighboring gene deleted in primary ciliary dyskinesia homolog (mouse)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Vital Dye CDr10b Labels the Zebrafish Mid-Intestine and Lumen. Sander V, et al. Molecules, 2017 Mar 13. PMID 28335401, Free PMC Article
  2. Leucophores are similar to xanthophores in their specification and differentiation processes in medaka. Kimura T, et al. Proc Natl Acad Sci U S A, 2014 May 20. PMID 24803434, Free PMC Article
  3. Specific expression and regulation of glucose transporters in zebrafish ionocytes. Tseng YC, et al. Am J Physiol Regul Integr Comp Physiol, 2009 Aug. PMID 19458281
  4. Fate plasticity and reprogramming in genetically distinct populations of Danio leucophores. Lewis VM, et al. Proc Natl Acad Sci U S A, 2019 Jun 11. PMID 31138706, Free PMC Article
  5. Single-cell RNA analysis identifies pre-migratory neural crest cells expressing markers of differentiated derivatives. Lencer E, et al. Elife, 2021 Aug 16. PMID 34397384, Free PMC Article

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables hexose transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within carbohydrate transport IEA
Inferred from Electronic Annotation
more info
  
involved_in monosaccharide transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
solute carrier family 2 member 15b
Names
solute carrier family 2 (facilitated glucose transporter), member 15b
zglut9b

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001020494.1 → NP_001018330.1  solute carrier family 2 member 15b

    See identical proteins and their annotated locations for NP_001018330.1

    Status: PROVISIONAL

    Source sequence(s)
    BC094298
    UniProtKB/TrEMBL
    Q52KK7
    Related
    ENSDARP00000069770.4, ENSDART00000075286.5
    Conserved Domains (2) summary
    cd06174
    Location:73 → 464
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    pfam00083
    Location:23 → 478
    Sugar_tr; Sugar (and other) transporter

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    31573245..31598417
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools