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zgc:110006 zgc:110006 [ Danio rerio (zebrafish) ]

Gene ID: 553573, updated on 27-Mar-2024

Summary

Official Symbol
zgc:110006provided by ZNC
Official Full Name
zgc:110006provided by ZNC
Primary source
ZFIN:ZDB-GENE-050522-119
See related
Ensembl:ENSDARG00000030803 AllianceGenome:ZFIN:ZDB-GENE-050522-119
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
eurl
Summary
Predicted to be involved in cerebral cortex neuron differentiation and positive regulation of dendritic spine development. Predicted to act upstream of or within cell differentiation and nervous system development. Orthologous to human C21orf91 (chromosome 21 open reading frame 91). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (35059856..35108671, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (35115996..35164811, complement)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene ALG5 dolichyl-phosphate beta-glucosyltransferase Neighboring gene exosome component 8 Neighboring gene SPT20 homolog, SAGA complex component Neighboring gene receptor-interacting serine-threonine kinase 4 Neighboring gene NOP2/Sun RNA methyltransferase 5

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC110006

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cell differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in cerebral cortex neuron differentiation ISS
Inferred from Sequence or Structural Similarity
more info
 
acts_upstream_of_or_within nervous system development IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of dendritic spine development ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001020552.1NP_001018388.1  protein EURL homolog

    See identical proteins and their annotated locations for NP_001018388.1

    Status: PROVISIONAL

    Source sequence(s)
    BC095124
    UniProtKB/Swiss-Prot
    Q503Y8
    UniProtKB/TrEMBL
    B2GSJ3
    Related
    ENSDARP00000049632.5, ENSDART00000049633.6
    Conserved Domains (1) summary
    pfam06937
    Location:1271
    EURL; EURL protein

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    35059856..35108671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)