ccdc86 coiled-coil domain containing 86 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: ccdc86provided by ZNC
Official Full Name: coiled-coil domain containing 86provided by ZNC
Primary source: ZFIN:ZDB-GENE-061009-11
See related: Ensembl:ENSDARG00000059908 AllianceGenome:ZFIN:ZDB-GENE-061009-11
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: im:7155625; si:ch211-217k17.7
Summary: Predicted to be located in nucleus. Predicted to be active in nucleolus. Is expressed in several structures, including head; immature eye; mesoderm; midbrain; and neural plate. Orthologous to human CCDC86 (coiled-coil domain containing 86). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 1

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	1	NC_007112.7 (52452010..52461322, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	1	NC_007112.6 (51817272..51826584, complement)

Chromosome 1 - NC_007112.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help

See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
is_active_in nucleolus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

Go to the top of the page Help

Preferred Names: coiled-coil domain-containing protein 86

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001145359.1 → NP_001138831.1 coiled-coil domain-containing protein 86

Status: PROVISIONAL

Source sequence(s)

BX323839

UniProtKB/TrEMBL

A0A8M1NPZ6, A2BG55

Related

ENSDARP00000078271.5, ENSDART00000083836.6

Conserved Domains (1) summary

pfam03879
Location:153 → 254

Cgr1; Cgr1 family