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Btg4 BTG anti-proliferation factor 4 [ Mus musculus (house mouse) ]

Gene ID: 56057, updated on 31-Aug-2021

Summary

Official Symbol
Btg4provided by MGI
Official Full Name
BTG anti-proliferation factor 4provided by MGI
Primary source
MGI:MGI:1860140
See related
Ensembl:ENSMUSG00000032056
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PC3; PC3B; C86116
Expression
Restricted expression toward testis adult (RPKM 2.3) See more
Orthologs
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Genomic context

See Btg4 in Genome Data Viewer
Location:
9; 9 A5.3
Exon count:
9
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (51013486..51031224)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (51102147..51119924)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (50924106..50927805)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene protein phosphatase 2, regulatory subunit A, beta Neighboring gene salt inducible kinase 2 Neighboring gene predicted gene, 32681 Neighboring gene layilin Neighboring gene HOATZ cilia and flagella associated protein Neighboring gene microRNA 34c Neighboring gene microRNA 34b Neighboring gene predicted gene, 32742 Neighboring gene POU domain, class 2, associating factor 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
protein BTG4
Names
B cell translocation gene 4
BTG family member 4
protein PC3b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_019493.4NP_062366.2  protein BTG4

    See identical proteins and their annotated locations for NP_062366.2

    Status: VALIDATED

    Source sequence(s)
    AK136149, AU023718
    Consensus CDS
    CCDS40629.1
    UniProtKB/Swiss-Prot
    O70552
    Related
    ENSMUSP00000110074.3, ENSMUST00000114431.4
    Conserved Domains (1) summary
    pfam07742
    Location:1114
    BTG; BTG family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    51013486..51031224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006510500.4XP_006510563.1  protein BTG4 isoform X1

    See identical proteins and their annotated locations for XP_006510563.1

    UniProtKB/Swiss-Prot
    O70552
    Related
    ENSMUSP00000149181.2, ENSMUST00000213680.2
    Conserved Domains (1) summary
    pfam07742
    Location:1114
    BTG; BTG family
  2. XM_006510499.4XP_006510562.1  protein BTG4 isoform X1

    See identical proteins and their annotated locations for XP_006510562.1

    UniProtKB/Swiss-Prot
    O70552
    Conserved Domains (1) summary
    pfam07742
    Location:1114
    BTG; BTG family
  3. XM_017313490.2XP_017168979.1  protein BTG4 isoform X1

    UniProtKB/Swiss-Prot
    O70552
    Conserved Domains (1) summary
    pfam07742
    Location:1114
    BTG; BTG family
  4. XM_006510501.4XP_006510564.1  protein BTG4 isoform X1

    See identical proteins and their annotated locations for XP_006510564.1

    UniProtKB/Swiss-Prot
    O70552
    Conserved Domains (1) summary
    pfam07742
    Location:1114
    BTG; BTG family
  5. XM_006510502.3XP_006510565.1  protein BTG4 isoform X1

    See identical proteins and their annotated locations for XP_006510565.1

    UniProtKB/Swiss-Prot
    O70552
    Conserved Domains (1) summary
    pfam07742
    Location:1114
    BTG; BTG family
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