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Sult1b1 sulfotransferase family 1B, member 1 [ Mus musculus (house mouse) ]

Gene ID: 56362, updated on 23-Jun-2021

Summary

Official Symbol
Sult1b1provided by MGI
Official Full Name
sulfotransferase family 1B, member 1provided by MGI
Primary source
MGI:MGI:2136282
See related
Ensembl:ENSMUSG00000029269
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ST1B1; St2b2
Expression
Biased expression in large intestine adult (RPKM 7.1), colon adult (RPKM 1.6) and 6 other tissues See more
Orthologs
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Genomic context

See Sult1b1 in Genome Data Viewer
Location:
5; 5 E1
Exon count:
10
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (87661186..87686054, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (87513327..87538195, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (87942364..87967220, complement)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene UDP glucuronosyltransferase 2 family, polypeptide B38 Neighboring gene UDP glucuronosyltransferase 2 family, polypeptide A1 Neighboring gene UDP glucuronosyltransferase 2 family, polypeptide A2 Neighboring gene sulfotransferase family 1D, member 1 Neighboring gene sulfotransferase family 1E, member 1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables aryl sulfotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables aryl sulfotransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables aryl sulfotransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables aryl sulfotransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
enables sulfotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables sulfotransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables sulfotransferase activity ISO
Inferred from Sequence Orthology
more info
PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in 3'-phosphoadenosine 5'-phosphosulfate metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in ethanol catabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in flavonoid metabolic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in phenol-containing compound metabolic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within steroid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in sulfation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within sulfation IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within sulfation ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in sulfation ISO
Inferred from Sequence Orthology
more info
 
involved_in thyroid hormone metabolic process ISO
Inferred from Sequence Orthology
more info
 
involved_in xenobiotic metabolic process ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytosol TAS
Traceable Author Statement
more info
PubMed 

General protein information

Preferred Names
sulfotransferase family cytosolic 1B member 1
Names
dopa/tyrosine sulfotransferase
sulfotransferase 1B1
NP_001343872.1
NP_001369766.1
NP_063931.1
XP_006535215.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001356943.1NP_001343872.1  sulfotransferase family cytosolic 1B member 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Variants 1-3 encode the same protein.
    Source sequence(s)
    AC158917, AK087595
    Consensus CDS
    CCDS19391.1
    Related
    ENSMUSP00000112679.2, ENSMUST00000117455.8
    Conserved Domains (1) summary
    pfam00685
    Location:38289
    Sulfotransfer_1; Sulfotransferase domain
  2. NM_001382837.1NP_001369766.1  sulfotransferase family cytosolic 1B member 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1-3 encode the same protein.
    Source sequence(s)
    AC158917
    Related
    ENSMUSP00000112844.2, ENSMUST00000120150.2
    Conserved Domains (1) summary
    pfam00685
    Location:38289
    Sulfotransfer_1; Sulfotransferase domain
  3. NM_019878.4NP_063931.1  sulfotransferase family cytosolic 1B member 1

    See identical proteins and their annotated locations for NP_063931.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1-3 encode the same protein.
    Source sequence(s)
    AC158917
    Consensus CDS
    CCDS19391.1
    UniProtKB/Swiss-Prot
    Q9QWG7
    Related
    ENSMUSP00000031199.5, ENSMUST00000031199.11
    Conserved Domains (1) summary
    pfam00685
    Location:38289
    Sulfotransfer_1; Sulfotransferase domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    87661186..87686054 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006535152.4XP_006535215.1  sulfotransferase family cytosolic 1B member 1 isoform X1

    See identical proteins and their annotated locations for XP_006535215.1

    UniProtKB/Swiss-Prot
    Q9QWG7
    Conserved Domains (1) summary
    pfam00685
    Location:38289
    Sulfotransfer_1; Sulfotransferase domain
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