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Arl10 ADP-ribosylation factor-like 10 [ Mus musculus (house mouse) ]

Gene ID: 56795, updated on 21-Apr-2024

Summary

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Official Symbol
Arl10provided by MGI
Official Full Name
ADP-ribosylation factor-like 10provided by MGI
Primary source
MGI:MGI:1930788
See related
Ensembl:ENSMUSG00000025870 AllianceGenome:MGI:1930788
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Arm1; Arl10a
Summary
Predicted to enable GTP binding activity. Is expressed in several structures, including brain; gut; hemolymphoid system gland; male reproductive gland or organ; and mesenteric adipose tissue. Orthologous to human ARL10 (ADP ribosylation factor like GTPase 10). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E18 (RPKM 14.5), whole brain E14.5 (RPKM 14.4) and 27 other tissues See more
Orthologs
human all
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Genomic context

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Location:
13 B1; 13 28.82 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (54722860..54730578)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (54575047..54582765)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 53205 Neighboring gene STARR-positive B cell enhancer ABC_E7241 Neighboring gene predicted gene 2830 Neighboring gene SUMO-interacting motifs containing 1 Neighboring gene RIKEN cDNA 4833439L19 gene Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:54666808-54666917 Neighboring gene predicted gene, 24195 Neighboring gene STARR-positive B cell enhancer ABC_E927 Neighboring gene NOP16 nucleolar protein Neighboring gene HIG1 domain family, member 2A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. RASL11A, member of a novel small monomeric GTPase gene family, is down-regulated in prostate tumors. Louro R, et al. Biochem Biophys Res Commun, 2004 Apr 9. PMID 15033445
  2. Transcriptome Analysis of Targeted Mouse Mutations Reveals the Topography of Local Changes in Gene Expression. West DB, et al. PLoS Genet, 2016 Feb. PMID 26839965, Free PMC Article
  3. Fancd2 in vivo interaction network reveals a non-canonical role in mitochondrial function. Zhang T, et al. Sci Rep, 2017 Apr 5. PMID 28378742, Free PMC Article
  4. High-throughput discovery of novel developmental phenotypes. Dickinson ME, et al. Nature, 2016 Sep 22. PMID 27626380, Free PMC Article
  5. The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Koscielny G, et al. Nucleic Acids Res, 2014 Jan. PMID 24194600, Free PMC Article

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (2) 

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • MGC144317

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
  
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
  
enables molecular_function ND
No biological Data available
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 10
Names
ADP-ribosylation factor-like 10A
ADP-ribosylation factor-like membrane-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001377082.1 → NP_001364011.1  ADP-ribosylation factor-like protein 10 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC155262
    UniProtKB/TrEMBL
    D3Z4X7
    Related
    ENSMUSP00000116506.2, ENSMUST00000156024.2
    Conserved Domains (1) summary
    cl38936
    Location:78 → 186
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. NM_019968.3 → NP_064352.2  ADP-ribosylation factor-like protein 10 isoform 1

    See identical proteins and their annotated locations for NP_064352.2

    Status: VALIDATED

    Source sequence(s)
    AC155262
    Consensus CDS
    CCDS26530.1
    UniProtKB/Swiss-Prot
    Q14C12, Q9QXJ4
    Related
    ENSMUSP00000026988.5, ENSMUST00000026988.11
    Conserved Domains (1) summary
    cl38936
    Location:78 → 236
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    54722860..54730578
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011244544.3 → XP_011242846.1  ADP-ribosylation factor-like protein 10 isoform X1

    Conserved Domains (1) summary
    cl38936
    Location:29 → 137
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9QXJ4.2 GenPept UniProtKB/Swiss-Prot:Q9QXJ4

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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