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PARP6 poly(ADP-ribose) polymerase family member 6 [ Homo sapiens (human) ]

Gene ID: 56965, updated on 3-Apr-2024

Summary

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Official Symbol
PARP6provided by HGNC
Official Full Name
poly(ADP-ribose) polymerase family member 6provided by HGNC
Primary source
HGNC:HGNC:26921
See related
Ensembl:ENSG00000137817 MIM:619439; AllianceGenome:HGNC:26921
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ARTD17; pART17; PARP-6-C; PARP-6-B1
Summary
Enables protein ADP-ribosylase activity. Involved in protein auto-ADP-ribosylation and protein mono-ADP-ribosylation. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in testis (RPKM 26.3), thyroid (RPKM 13.7) and 25 other tissues See more
Orthologs
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Genomic context

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See PARP6 in Genome Data Viewer
Location:
15q23
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (72241181..72272554, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (70057855..70089700, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (72533522..72564895, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903522 Neighboring gene Sharpr-MPRA regulatory region 4122 Neighboring gene GRAM domain containing 2A Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr15:72485963-72486586 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9714 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6617 Neighboring gene pyruvate kinase M1/2 Neighboring gene Sharpr-MPRA regulatory region 1213 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9715 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6618 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6619 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr15:72529434-72530633 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6620 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9717 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9718 Neighboring gene uncharacterized LOC105370887 Neighboring gene CUGBP Elav-like family member 6 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6621

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. PARP6 acts as a tumor suppressor via downregulating Survivin expression in colorectal cancer. Qi G, et al. Oncotarget, 2016 Apr 5. PMID 26934315, Free PMC Article
  2. PARP6, a mono(ADP-ribosyl) transferase and a negative regulator of cell proliferation, is involved in colorectal cancer development. Tuncel H, et al. Int J Oncol, 2012 Dec. PMID 23042038
  3. Characterization of PARP6 Function in Knockout Mice and Patients with Developmental Delay. Vermehren-Schmaedick A, et al. Cells, 2021 May 22. PMID 34067418, Free PMC Article
  4. Knockdown of PARP6 or survivin promotes cell apoptosis and inhibits cell invasion of colorectal adenocarcinoma cells. Wang H, et al. Oncol Rep, 2017 Apr. PMID 28260087
  5. The PARP superfamily. Amé JC, et al. Bioessays, 2004 Aug. PMID 15273990

See all (15) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Characterization of PARP6 Function in Knockout Mice and Patients with Developmental Delay.
    Title: Characterization of PARP6 Function in Knockout Mice and Patients with Developmental Delay.
  2. Results showed that both PARP6 and survivin exhibited higher expression in colorectal adenocarcinoma tissues and cell lines. knockdown of either PARP6 or survivin promotes cell apoptosis and inhibits the cell invasion of colorectal adenocarcinoma cells suggesting a significant correlation between theses 2 proteins.
    Title: Knockdown of PARP6 or survivin promotes cell apoptosis and inhibits cell invasion of colorectal adenocarcinoma cells.
  3. PARP6 acts as a tumor suppressor via downregulating Survivin expression in CRC. PARP6 can be a novel diagnostic and therapeutic target together with Survivin for CRC.
    Title: PARP6 acts as a tumor suppressor via downregulating Survivin expression in colorectal cancer.
  4. PARP6, a mono(ADP-ribosyl) transferase and a negative regulator of cell proliferation, is involved in colorectal cancer development, PARP6-positive colorectal cancer had a good prognosis.
    Title: PARP6, a mono(ADP-ribosyl) transferase and a negative regulator of cell proliferation, is involved in colorectal cancer development.
  5. Clinical trial of gene-disease association and gene-environment interaction. (HuGE Navigator)
    Title: Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.
Submit: New GeneRIF Correction

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • MGC131971

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables NAD+ ADP-ribosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables NAD+- protein-aspartate ADP-ribosyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables NAD+- protein-cysteine ADP-ribosyltransferase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables kinase binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables nucleotidyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activator activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in positive regulation of dendrite morphogenesis IEA
Inferred from Electronic Annotation
more info
  
involved_in protein auto-ADP-ribosylation IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
is_active_in endoplasmic reticulum tubular network IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in nuclear envelope IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
protein mono-ADP-ribosyltransferase PARP6
Names
ADP-ribosyltransferase diphtheria toxin-like 17
MIEREN, class I
MIEREN, class II
PARP-6
poly [ADP-ribose] polymerase 6
NP_001310444.1
NP_001310445.1
NP_001310448.1
NP_001310450.1
NP_001310451.1
NP_001310452.1
NP_001310453.1
NP_001310454.1
NP_001310455.1
NP_001310457.1
NP_001310459.1
NP_001310460.1
NP_001310461.1
NP_064599.2
XP_011520107.1
XP_047288829.1
XP_047288830.1
XP_047288831.1
XP_047288832.1
XP_047288833.1
XP_054234446.1
XP_054234447.1
XP_054234448.1
XP_054234449.1
XP_054234450.1
XP_054234451.1
XP_054234452.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001323515.2 → NP_001310444.1  protein mono-ADP-ribosyltransferase PARP6 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC009690
    UniProtKB/TrEMBL
    A0PJ50
    Related
    ENSP00000455815.1, ENST00000567974.5
    Conserved Domains (1) summary
    cd01341
    Location:451 → 575
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  2. NM_001323516.2 → NP_001310445.1  protein mono-ADP-ribosyltransferase PARP6 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC009690
    UniProtKB/TrEMBL
    A0PJ50
    Conserved Domains (1) summary
    cd01341
    Location:451 → 575
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  3. NM_001323519.2 → NP_001310448.1  protein mono-ADP-ribosyltransferase PARP6 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC009690
    UniProtKB/TrEMBL
    A0PJ50
    Conserved Domains (1) summary
    cd01341
    Location:450 → 574
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  4. NM_001323521.2 → NP_001310450.1  protein mono-ADP-ribosyltransferase PARP6 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC009690
    UniProtKB/TrEMBL
    A0PJ50
    Conserved Domains (1) summary
    cd01341
    Location:450 → 574
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  5. NM_001323522.2 → NP_001310451.1  protein mono-ADP-ribosyltransferase PARP6 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC009690
    Consensus CDS
    CCDS10241.2
    UniProtKB/Swiss-Prot
    Q2NL67, Q9H7C5, Q9H9X6, Q9HAF3, Q9NPS6, Q9UFG4
    UniProtKB/TrEMBL
    A0PJ50
    Conserved Domains (1) summary
    cd01341
    Location:470 → 594
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  6. NM_001323523.2 → NP_001310452.1  protein mono-ADP-ribosyltransferase PARP6 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC009690
    UniProtKB/TrEMBL
    A0PJ50
    Conserved Domains (1) summary
    cd01341
    Location:450 → 574
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  7. NM_001323524.2 → NP_001310453.1  protein mono-ADP-ribosyltransferase PARP6 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC009690
    UniProtKB/TrEMBL
    A0PJ50
    Conserved Domains (1) summary
    cd01341
    Location:450 → 574
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  8. NM_001323525.2 → NP_001310454.1  protein mono-ADP-ribosyltransferase PARP6 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC009690
    UniProtKB/TrEMBL
    A0PJ50
    Conserved Domains (1) summary
    cd01341
    Location:471 → 595
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  9. NM_001323526.2 → NP_001310455.1  protein mono-ADP-ribosyltransferase PARP6 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC009690
    UniProtKB/TrEMBL
    A0PJ50
    Conserved Domains (1) summary
    cd01341
    Location:450 → 574
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  10. NM_001323528.2 → NP_001310457.1  protein mono-ADP-ribosyltransferase PARP6 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC009690
    UniProtKB/TrEMBL
    A0PJ50
    Conserved Domains (1) summary
    cd01341
    Location:471 → 595
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  11. NM_001323530.2 → NP_001310459.1  protein mono-ADP-ribosyltransferase PARP6 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC009690
    UniProtKB/TrEMBL
    A0PJ50
    Conserved Domains (1) summary
    cd01341
    Location:451 → 575
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  12. NM_001323531.2 → NP_001310460.1  protein mono-ADP-ribosyltransferase PARP6 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC009690
    UniProtKB/TrEMBL
    A0PJ50
    Conserved Domains (1) summary
    cd01341
    Location:471 → 595
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  13. NM_001323532.2 → NP_001310461.1  protein mono-ADP-ribosyltransferase PARP6 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AC009690
    Consensus CDS
    CCDS10241.2
    UniProtKB/Swiss-Prot
    Q2NL67, Q9H7C5, Q9H9X6, Q9HAF3, Q9NPS6, Q9UFG4
    UniProtKB/TrEMBL
    A0PJ50
    Related
    ENSP00000456348.1, ENST00000569795.6
    Conserved Domains (1) summary
    cd01341
    Location:470 → 594
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  14. NM_020214.4 → NP_064599.2  protein mono-ADP-ribosyltransferase PARP6 isoform 1

    See identical proteins and their annotated locations for NP_064599.2

    Status: VALIDATED

    Source sequence(s)
    AC009690
    Consensus CDS
    CCDS10241.2
    UniProtKB/Swiss-Prot
    Q2NL67, Q9H7C5, Q9H9X6, Q9HAF3, Q9NPS6, Q9UFG4
    UniProtKB/TrEMBL
    A0PJ50
    Related
    ENSP00000287196.9, ENST00000287196.13
    Conserved Domains (1) summary
    cd01341
    Location:470 → 594
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

RNA

  1. NR_136594.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC009690

  2. NR_136596.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC009690

  3. NR_136599.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC009690

  4. NR_136603.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC009690

  5. NR_136604.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC009690

  6. NR_136605.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC009690
    Related
    ENST00000567440.5

  7. NR_136606.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC009690

  8. NR_136607.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC009690

  9. NR_136608.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC009690

  10. NR_136609.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC009690

  11. NR_136610.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC009690

  12. NR_136611.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC009690

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    72241181..72272554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047432874.1 → XP_047288830.1  protein mono-ADP-ribosyltransferase PARP6 isoform X2

    UniProtKB/Swiss-Prot
    Q2NL67, Q9H7C5, Q9H9X6, Q9HAF3, Q9NPS6, Q9UFG4

  2. XM_047432873.1 → XP_047288829.1  protein mono-ADP-ribosyltransferase PARP6 isoform X1

  3. XM_011521805.3 → XP_011520107.1  protein mono-ADP-ribosyltransferase PARP6 isoform X6

    See identical proteins and their annotated locations for XP_011520107.1

    UniProtKB/TrEMBL
    A0PJ50
    Conserved Domains (1) summary
    cd01341
    Location:336 → 460
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  4. XM_047432877.1 → XP_047288833.1  protein mono-ADP-ribosyltransferase PARP6 isoform X5

    Related
    ENSP00000456468.1, ENST00000564610.5

  5. XM_047432876.1 → XP_047288832.1  protein mono-ADP-ribosyltransferase PARP6 isoform X4

    UniProtKB/TrEMBL
    J7MDH3
    Related
    ENSP00000260376.7, ENST00000260376.11
    Conserved Domains (2) summary
    cd01341
    Location:222 → 358
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...
    cl00283
    Location:470 → 497
    ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

  6. XM_047432875.1 → XP_047288831.1  protein mono-ADP-ribosyltransferase PARP6 isoform X3

    UniProtKB/TrEMBL
    H3BRR4
    Related
    ENSP00000456370.1, ENST00000565443.5

RNA

  1. XR_007064475.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    70057855..70089700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054378472.1 → XP_054234447.1  protein mono-ADP-ribosyltransferase PARP6 isoform X1

  2. XM_054378473.1 → XP_054234448.1  protein mono-ADP-ribosyltransferase PARP6 isoform X2

    UniProtKB/Swiss-Prot
    Q2NL67, Q9H7C5, Q9H9X6, Q9HAF3, Q9NPS6, Q9UFG4

  3. XM_054378471.1 → XP_054234446.1  protein mono-ADP-ribosyltransferase PARP6 isoform X1

  4. XM_054378477.1 → XP_054234452.1  protein mono-ADP-ribosyltransferase PARP6 isoform X6

  5. XM_054378476.1 → XP_054234451.1  protein mono-ADP-ribosyltransferase PARP6 isoform X5

  6. XM_054378475.1 → XP_054234450.1  protein mono-ADP-ribosyltransferase PARP6 isoform X4

    UniProtKB/TrEMBL
    J7MDH3

  7. XM_054378474.1 → XP_054234449.1  protein mono-ADP-ribosyltransferase PARP6 isoform X3

    UniProtKB/TrEMBL
    H3BRR4

RNA

  1. XR_008488995.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_020213.1: Suppressed sequence

    Description
    NM_020213.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2NL67.1 GenPept UniProtKB/Swiss-Prot:Q2NL67

Gene LinkOut

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