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Retnlb resistin like beta [ Mus musculus (house mouse) ]

Gene ID: 57263, updated on 23-Jun-2021

Summary

Official Symbol
Retnlbprovided by MGI
Official Full Name
resistin like betaprovided by MGI
Primary source
MGI:MGI:1888505
See related
Ensembl:ENSMUSG00000022650
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Rel; Xcp; Fizz; Xcp3; Fizz2; Relmb; RELMbeta; 9030012B21Rik
Expression
Restricted expression toward colon adult (RPKM 34.9) See more
Orthologs
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Genomic context

See Retnlb in Genome Data Viewer
Location:
16 B5; 16 30.75 cM
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (48637219..48639255)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (48816856..48818892)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 16 NC_000082.5 (48816969..48819005)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene microrchidia 1 Neighboring gene predicted gene, 41458 Neighboring gene T cell receptor associated transmembrane adaptor 1 Neighboring gene TWIST neighbor pseudogene Neighboring gene resistin like alpha Neighboring gene resistin like gamma

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within response to bacterium IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
resistin-like beta
Names
cysteine-rich secreted protein A12-beta
cysteine-rich secreted protein FIZZ2
found in inflammatory zone 2
resistin-like molecule beta

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_023881.4NP_076370.3  resistin-like beta precursor

    See identical proteins and their annotated locations for NP_076370.3

    Status: VALIDATED

    Source sequence(s)
    AF290871, AK020240
    Consensus CDS
    CCDS28210.1
    UniProtKB/Swiss-Prot
    Q99P86
    UniProtKB/TrEMBL
    A0A0R4J042
    Related
    ENSMUSP00000023328.7, ENSMUST00000023328.8
    Conserved Domains (1) summary
    pfam06954
    Location:23104
    Resistin; Resistin

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    48637219..48639255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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