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Cxcl14 chemokine (C-X-C motif) ligand 14 [ Mus musculus (house mouse) ]

Gene ID: 57266, updated on 23-Jun-2021

Summary

Official Symbol
Cxcl14provided by MGI
Official Full Name
chemokine (C-X-C motif) ligand 14provided by MGI
Primary source
MGI:MGI:1888514
See related
Ensembl:ENSMUSG00000021508
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
BR; KS1; Kec; BMAC; BRAK; MIP-; NJAC; Scyb1; MIP-2g; Scyb14; AI414372; bolekine; MIP2gamma; 1110031L23Rik; 1200006I23Rik
Expression
Broad expression in limb E14.5 (RPKM 108.6), bladder adult (RPKM 100.8) and 19 other tissues See more
Orthologs
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Genomic context

See Cxcl14 in Genome Data Viewer
Location:
13; 13 B1
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (56436456..56444624, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (56288643..56296811, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (56390004..56397912, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930550C17 gene Neighboring gene neurogenin 1 Neighboring gene predicted gene, 17878 Neighboring gene predicted gene, 24716

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

General gene information

Markers

Homology

Clone Names

  • MGC90667

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables chemokine activity IEA
Inferred from Electronic Annotation
more info
 
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
C-X-C motif chemokine 14
Names
B-cell and monocyte-activating chemokine
chemokine BRAK
kidney-expressed chemokine CXC
musculus CXC chemokine MIP-2gamma
small inducible cytokine subfamily B (Cys-X-Cys), member 14
small-inducible cytokine B14

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_019568.2NP_062514.2  C-X-C motif chemokine 14 precursor

    See identical proteins and their annotated locations for NP_062514.2

    Status: VALIDATED

    Source sequence(s)
    AK076112, AU035952, BC079661, BI133967
    Consensus CDS
    CCDS36679.1
    UniProtKB/Swiss-Prot
    Q9WUQ5
    UniProtKB/TrEMBL
    Q6AXC2
    Related
    ENSMUSP00000021970.10, ENSMUST00000021970.11
    Conserved Domains (1) summary
    cl00134
    Location:2485
    Chemokine; small cytokines, including a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; distinguished from other cytokines by their receptors, which are G-protein coupled receptors; divided into 4 ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    56436456..56444624 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011244545.3XP_011242847.1  C-X-C motif chemokine 14 isoform X1

    See identical proteins and their annotated locations for XP_011242847.1

    Conserved Domains (1) summary
    cl00134
    Location:2485
    Chemokine; small cytokines, including a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; distinguished from other cytokines by their receptors, which are G-protein coupled receptors; divided into 4 ...
  2. XM_006517307.5XP_006517370.1  C-X-C motif chemokine 14 isoform X1

    See identical proteins and their annotated locations for XP_006517370.1

    Conserved Domains (1) summary
    cl00134
    Location:2485
    Chemokine; small cytokines, including a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; distinguished from other cytokines by their receptors, which are G-protein coupled receptors; divided into 4 ...
  3. XM_006517308.5XP_006517371.1  C-X-C motif chemokine 14 isoform X2

    See identical proteins and their annotated locations for XP_006517371.1

    UniProtKB/Swiss-Prot
    Q9WUQ5
    Conserved Domains (1) summary
    cl00134
    Location:2485
    Chemokine; small cytokines, including a number of secreted growth factors and interferons involved in mitogenic, chemotactic, and inflammatory activity; distinguished from other cytokines by their receptors, which are G-protein coupled receptors; divided into 4 ...
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