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IVa2 encapsidation protein IVa2 [ Human mastadenovirus C ]

Gene ID: 5739974, updated on 18-Aug-2023

Summary

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Gene symbol
IVa2
Gene description
encapsidation protein IVa2
Locus tag
HAdVC_gp05
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Human mastadenovirus C (serotype: Human adenovirus 2, acronym: HAdV-2, acronym: HAdV-C, nat-host: Homo sapiens)
Lineage
Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus
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Genomic context

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Sequence:
NC_001405.1 (4050..5826, complement)

NC_001405.1Genomic Context describing neighboring genes Neighboring gene control protein E1A;control protein E1A 243R Neighboring gene control protein E1B 19K;control protein E1B 55K Neighboring gene capsid protein IX Neighboring gene DNA polymerase;terminal protein precursor pTP Neighboring gene capsid protein precursor pIIIa;encapsidation protein 52K;protein 13.6K Neighboring gene core protein V;core protein precursor pVII;core protein precursor pX;penton base Neighboring gene capsid protein precursor pVI;hexon;protease Neighboring gene capsid protein precursor pVIII;encapsidation protein 22K;hexon assembly protein 100K;protein 33K Neighboring gene fiber Neighboring gene miscRNA Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001405.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of Empty adenovirus particles assembled in the absence of a functional adenovirus IVa2 protein. Ostapchuk P, et al. J Virol, 2011 Jun. PMID 21450831, Free PMC Article
  2. Adenoviral E2 IVa2 protein interacts with L4 33K protein and E2 DNA-binding protein. Ahi YS, et al. J Gen Virol, 2013 Jun. PMID 23388198

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. IVa2, 33K and DBP form a complex at a unique vertex on viral capsids and cooperate in genome packaging.
    Title: Adenoviral E2 IVa2 protein interacts with L4 33K protein and E2 DNA-binding protein.
  2. The authors conclude that the major role of IVa2 is in viral DNA packaging.
    Title: Characterization of Empty adenovirus particles assembled in the absence of a functional adenovirus IVa2 protein.
Submit: New GeneRIF Correction

General gene information

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prim_transcript

  • Loc: c5826-4050 experiment = transcript mapping

regulatory

  • Loc: c4090-4085 regulatory_class = polyA_signal_sequence

General protein information

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Preferred Names
encapsidation protein IVa2
NP_040515.1
  • genus-common

VOG classification

Description:

  • VOGd0005 [A] Adenovirus maturation protein (protein IVA2)
  • Auxilary Proteins

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001405.1 Reference assembly

    Range
    4050..5826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_040515.1 encapsidation protein IVa2 [Human mastadenovirus C]

    See identical proteins and their annotated locations for NP_040515.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P03272
    UniProtKB/TrEMBL
    A0A0U5BZK4, A8D0L0, T1UIS5
    Conserved Domains (1) summary
    pfam02456
    Location:76 → 447
    Adeno_IVa2; Adenovirus IVa2 protein
Protein Accession Links
GenPept Link UniProtKB Link
AAA92205.1

Gene LinkOut

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