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Rhbg Rhesus blood group-associated B glycoprotein [ Mus musculus (house mouse) ]

Gene ID: 58176, updated on 23-Jun-2021

Summary

Official Symbol
Rhbgprovided by MGI
Official Full Name
Rhesus blood group-associated B glycoproteinprovided by MGI
Primary source
MGI:MGI:1927379
See related
Ensembl:ENSMUSG00000104445
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Biased expression in kidney adult (RPKM 38.4), large intestine adult (RPKM 18.5) and 10 other tissues See more
Orthologs
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Genomic context

See Rhbg in Genome Data Viewer
Location:
3 F1; 3 38.78 cM
Exon count:
10
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (88150181..88162046, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (88242874..88254739, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 3 NC_000069.5 (88046796..88058606, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene predicted gene 3764 Neighboring gene microRNA 9b-1 Neighboring gene microRNA 9-1 Neighboring gene VISTA enhancer mm474 Neighboring gene TSSK6 activating co-chaperone Neighboring gene chaperonin containing Tcp1, subunit 3 (gamma)

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (2)  1 citation
  • Endonuclease-mediated (1) 

Pathways from PubChem

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ammonium transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables ammonium transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables ammonium transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
enables ankyrin binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in ammonium transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in ammonium transport IDA
Inferred from Direct Assay
more info
PubMed 
involved_in ammonium transport ISO
Inferred from Sequence Orthology
more info
 
involved_in transepithelial ammonium transport ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in anchored component of plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in basolateral plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in basolateral plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in integral component of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in integral component of plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in integral component of plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in spectrin-associated cytoskeleton ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
ammonium transporter Rh type B
Names
Rh type B glycoprotein
rh family type B glycoprotein
rhesus blood group family type B glycoprotein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_021375.3NP_067350.2  ammonium transporter Rh type B precursor

    See identical proteins and their annotated locations for NP_067350.2

    Status: PROVISIONAL

    Source sequence(s)
    AK081882
    Consensus CDS
    CCDS17466.1
    UniProtKB/Swiss-Prot
    Q8BUX5
    Related
    ENSMUSP00000130767.2, ENSMUST00000171887.4
    Conserved Domains (1) summary
    cl03012
    Location:58403
    Ammonium_transp; Ammonium Transporter Family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    88150181..88162046 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006501826.4XP_006501889.1  ammonium transporter Rh type B isoform X1

    Conserved Domains (1) summary
    cl03012
    Location:58362
    Ammonium_transp; Ammonium Transporter Family
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