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suclg1 succinate-CoA ligase, alpha subunit [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 594977, updated on 5-Mar-2024

Summary

Official Symbol
suclg1provided by Xenbase
Official Full Name
succinate-CoA ligase, alpha subunitprovided by Xenbase
Primary source
Xenbase:XB-GENE-478220
See related
Ensembl:ENSXETG00000001690
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
galpha; mtdps9; sucla1
Orthologs
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Genomic context

See suclg1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (9775906..9796087)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (4854171..5081713, complement)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene immunoglobulin kappa variable 6D-21-like Neighboring gene immunoglobulin kappa variable 6D-21-like Neighboring gene SAP domain-containing ribonucleoprotein pseudogene Neighboring gene uncharacterized LOC116408263

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC107943

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables ligase activity IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables succinate-CoA ligase (ADP-forming) activity IEA
Inferred from Electronic Annotation
more info
 
enables succinate-CoA ligase (GDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial
NP_001025589.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030418.1NP_001025589.1  succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial

    See identical proteins and their annotated locations for NP_001025589.1

    Status: PROVISIONAL

    Source sequence(s)
    BC091038
    UniProtKB/TrEMBL
    F6PQ34, L7N2I9, Q5BKK8
    Related
    ENSXETP00000003559.4, ENSXETT00000003559.4
    Conserved Domains (1) summary
    PTZ00187
    Location:3323
    PTZ00187; succinyl-CoA synthetase alpha subunit; Provisional

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    9775906..9796087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)