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C21H11orf54 chromosome 21 C11orf54 homolog [ Canis lupus familiaris (dog) ]

Gene ID: 607137, updated on 5-Mar-2024

Summary

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Official Symbol
C21H11orf54provided by VGNC
Official Full Name
chromosome 21 C11orf54 homologprovided by VGNC
Primary source
VGNC:VGNC:52065
See related
Ensembl:ENSCAFG00845020928
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 21
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 21 NC_051825.1 (7173928..7193277, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 21 NC_006603.4 (7008685..7028015, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 21 NC_049242.1 (7073365..7092705, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 21 NC_049281.1 (6960106..6979446, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 21 NC_049762.1 (7024513..7043848, complement)

Chromosome 21 - NC_051825.1Genomic Context describing neighboring genes Neighboring gene V-set and transmembrane domain containing 5 Neighboring gene mediator complex subunit 17 Neighboring gene small nucleolar RNA SNORA40 Neighboring gene small nucleolar RNA SNORA18 Neighboring gene TATA-box binding protein associated factor, RNA polymerase I subunit D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on ester bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ester hydrolase C11orf54 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051825.1 Reference ROS_Cfam_1.0

    Range
    7173928..7193277 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038429770.1 → XP_038285698.1  ester hydrolase C11orf54 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C0KVZ8, A0A8C0SZ03, A0A8I3S4N7, A0A8P0NZG3
    Related
    ENSCAFP00845028997.1, ENSCAFT00845037030.1
    Conserved Domains (1) summary
    cd17298
    Location:25 → 256
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012

  2. XM_038429769.1 → XP_038285697.1  ester hydrolase C11orf54 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0R2I9, A0A8C0SZ26, A0A8I3S218, A0A8P0N738
    Conserved Domains (1) summary
    cd17298
    Location:25 → 315
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012

  3. XM_038429768.1 → XP_038285696.1  ester hydrolase C11orf54 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0R2I9, A0A8C0SZ26, A0A8I3S218, A0A8P0N738
    Related
    ENSCAFP00845028912.1, ENSCAFT00845036928.1
    Conserved Domains (1) summary
    cd17298
    Location:25 → 315
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049281.1 Alternate UMICH_Zoey_3.1

    Range
    6960106..6979446 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038505182.1 → XP_038361110.1  ester hydrolase C11orf54 homolog isoform X2

    Conserved Domains (1) summary
    cd17298
    Location:25 → 256
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012

  2. XM_038505181.1 → XP_038361109.1  ester hydrolase C11orf54 homolog isoform X1

    Conserved Domains (1) summary
    cd17298
    Location:25 → 315
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012

  3. XM_038505180.1 → XP_038361108.1  ester hydrolase C11orf54 homolog isoform X1

    Conserved Domains (1) summary
    cd17298
    Location:25 → 315
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049762.1 Alternate UNSW_CanFamBas_1.0

    Range
    7024513..7043848 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038632456.1 → XP_038488384.1  ester hydrolase C11orf54 homolog isoform X2

    Conserved Domains (1) summary
    cd17298
    Location:25 → 256
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012

  2. XM_038632455.1 → XP_038488383.1  ester hydrolase C11orf54 homolog isoform X1

    Conserved Domains (1) summary
    cd17298
    Location:25 → 315
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012

  3. XM_038632454.1 → XP_038488382.1  ester hydrolase C11orf54 homolog isoform X1

    Conserved Domains (1) summary
    cd17298
    Location:25 → 315
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049242.1 Alternate UU_Cfam_GSD_1.0

    Range
    7073365..7092705 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038568312.1 → XP_038424240.1  ester hydrolase C11orf54 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C0KVZ8, A0A8C0SZ03, A0A8I3S4N7, A0A8P0NZG3
    Conserved Domains (1) summary
    cd17298
    Location:25 → 256
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012

  2. XM_038568311.1 → XP_038424239.1  ester hydrolase C11orf54 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0R2I9, A0A8C0SZ26, A0A8I3S218, A0A8P0N738
    Conserved Domains (1) summary
    cd17298
    Location:25 → 315
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012

  3. XM_038568310.1 → XP_038424238.1  ester hydrolase C11orf54 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0R2I9, A0A8C0SZ26, A0A8I3S218, A0A8P0N738
    Conserved Domains (1) summary
    cd17298
    Location:25 → 315
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006603.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    7008685..7028015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005633360.4 → XP_005633417.1  ester hydrolase C11orf54 homolog isoform X1

    See identical proteins and their annotated locations for XP_005633417.1

    UniProtKB/TrEMBL
    A0A8C0R2I9, A0A8C0SZ26, A0A8I3S218, A0A8P0N738
    Conserved Domains (1) summary
    cd17298
    Location:25 → 315
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012

  2. XM_005633361.4 → XP_005633418.1  ester hydrolase C11orf54 homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C0KVZ8, A0A8C0SZ03, A0A8I3S4N7, A0A8P0NZG3
    Conserved Domains (1) summary
    cd17298
    Location:25 → 256
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012

  3. XM_038456336.1 → XP_038312264.1  ester hydrolase C11orf54 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0R2I9, A0A8C0SZ26, A0A8I3S218, A0A8P0N738
    Conserved Domains (1) summary
    cd17298
    Location:25 → 315
    DUF1907; proteins similar to putative ester hydrolase C11orf54/PTD012
Nucleotide Protein
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