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FANCC FA complementation group C [ Canis lupus familiaris (dog) ]

Gene ID: 607277, updated on 5-Mar-2024

Summary

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Official Symbol
FANCCprovided by VGNC
Official Full Name
FA complementation group Cprovided by VGNC
Primary source
VGNC:VGNC:40718
See related
Ensembl:ENSCAFG00845004921
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
21
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (71693614..71983350)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (72151677..72440952)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (71975513..72265108)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (71505368..71794755)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (71269071..71558824)

Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102151730 Neighboring gene metal transporter CNNM3-like Neighboring gene uncharacterized LOC111096365 Neighboring gene uncharacterized LOC119870813 Neighboring gene uncharacterized LOC111096364 Neighboring gene microRNA mir-24-1 Neighboring gene microRNA mir-27b Neighboring gene microRNA mir-23b Neighboring gene aminopeptidase O (putative) Neighboring gene uncharacterized LOC119870812 Neighboring gene uncharacterized LOC119866418

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cellular response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Fanconi anaemia nuclear complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Fanconi anemia group C protein
Names
Fanconi anemia complementation group C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051805.1 Reference ROS_Cfam_1.0

    Range
    71693614..71983350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038654995.1 → XP_038510923.1  Fanconi anemia group C protein isoform X2

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 502
    Fanconi_C; Fanconi anaemia group C protein

  2. XM_038654992.1 → XP_038510920.1  Fanconi anemia group C protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MKN2
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  3. XM_038654993.1 → XP_038510921.1  Fanconi anemia group C protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MKN2
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  4. XM_038654991.1 → XP_038510919.1  Fanconi anemia group C protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MKN2
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  5. XM_038654996.1 → XP_038510924.1  Fanconi anemia group C protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0LB89, A0A8I3MPJ6, A0A8I3RSD0, A0A8P0SX94
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  6. XM_038654997.1 → XP_038510925.1  Fanconi anemia group C protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0LB89, A0A8I3MPJ6, A0A8I3RSD0, A0A8P0SX94
    Related
    ENSCAFP00845006942.1, ENSCAFT00845008806.1
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  7. XM_038654994.1 → XP_038510922.1  Fanconi anemia group C protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MKN2
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049261.1 Alternate UMICH_Zoey_3.1

    Range
    71505368..71794755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038466199.1 → XP_038322127.1  Fanconi anemia group C protein isoform X2

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 502
    Fanconi_C; Fanconi anaemia group C protein

  2. XM_038466195.1 → XP_038322123.1  Fanconi anemia group C protein isoform X1

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  3. XM_038466196.1 → XP_038322124.1  Fanconi anemia group C protein isoform X1

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  4. XM_038466194.1 → XP_038322122.1  Fanconi anemia group C protein isoform X1

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  5. XM_038466200.1 → XP_038322128.1  Fanconi anemia group C protein isoform X3

  6. XM_038466201.1 → XP_038322129.1  Fanconi anemia group C protein isoform X3

  7. XM_038466198.1 → XP_038322126.1  Fanconi anemia group C protein isoform X1

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  8. XM_038466197.1 → XP_038322125.1  Fanconi anemia group C protein isoform X1

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

    Range
    71269071..71558824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038591197.1 → XP_038447125.1  Fanconi anemia group C protein isoform X2

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 502
    Fanconi_C; Fanconi anaemia group C protein

  2. XM_038591193.1 → XP_038447121.1  Fanconi anemia group C protein isoform X1

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  3. XM_038591194.1 → XP_038447122.1  Fanconi anemia group C protein isoform X1

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  4. XM_038591192.1 → XP_038447120.1  Fanconi anemia group C protein isoform X1

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  5. XM_038591198.1 → XP_038447126.1  Fanconi anemia group C protein isoform X3

  6. XM_038591199.1 → XP_038447127.1  Fanconi anemia group C protein isoform X3

  7. XM_038591196.1 → XP_038447124.1  Fanconi anemia group C protein isoform X1

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  8. XM_038591195.1 → XP_038447123.1  Fanconi anemia group C protein isoform X1

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

    Range
    71975513..72265108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038526897.1 → XP_038382825.1  Fanconi anemia group C protein isoform X2

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 502
    Fanconi_C; Fanconi anaemia group C protein

  2. XM_038526893.1 → XP_038382821.1  Fanconi anemia group C protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MKN2
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  3. XM_038526894.1 → XP_038382822.1  Fanconi anemia group C protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MKN2
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  4. XM_038526892.1 → XP_038382820.1  Fanconi anemia group C protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MKN2
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  5. XM_038526898.1 → XP_038382826.1  Fanconi anemia group C protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0LB89, A0A8C0MM36, A0A8I3MPJ6

  6. XM_038526899.1 → XP_038382827.1  Fanconi anemia group C protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0LB89, A0A8C0MM36, A0A8I3MPJ6

  7. XM_038526896.1 → XP_038382824.1  Fanconi anemia group C protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MKN2
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  8. XM_038526895.1 → XP_038382823.1  Fanconi anemia group C protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MKN2
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    72151677..72440952
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038566399.1 → XP_038422327.1  Fanconi anemia group C protein isoform X2

    Conserved Domains (1) summary
    pfam02106
    Location:10 → 502
    Fanconi_C; Fanconi anaemia group C protein

  2. XM_038566160.1 → XP_038422088.1  Fanconi anemia group C protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MKN2
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  3. XM_038566244.1 → XP_038422172.1  Fanconi anemia group C protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MKN2
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  4. XM_038566081.1 → XP_038422009.1  Fanconi anemia group C protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MKN2
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  5. XM_022420404.2 → XP_022276112.1  Fanconi anemia group C protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0LB89, A0A8I3MPJ6, A0A8I3RSD0, A0A8P0SX94
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  6. XM_022420405.2 → XP_022276113.1  Fanconi anemia group C protein isoform X3

    UniProtKB/TrEMBL
    A0A8C0LB89, A0A8I3MPJ6, A0A8I3RSD0, A0A8P0SX94
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein

  7. XM_038566325.1 → XP_038422253.1  Fanconi anemia group C protein isoform X1

    UniProtKB/TrEMBL
    A0A8C0MKN2
    Conserved Domains (1) summary
    pfam02106
    Location:10 → 557
    Fanconi_C; Fanconi anaemia group C protein
Nucleotide Protein
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