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POMT1 protein O-mannosyltransferase 1 [ Canis lupus familiaris (dog) ]

Gene ID: 608039, updated on 28-Sep-2021

Summary

Official Symbol
POMT1provided by VGNC
Official Full Name
protein O-mannosyltransferase 1provided by VGNC
Primary source
VGNC:VGNC:44810
See related
EnsemblRapid:ENSCAFG00845018932
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See POMT1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
26
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (53517596..53535056, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (51882359..51899815, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (52708808..52726275, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (52297027..52312897, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (52614407..52631871, complement)
105 previous assembly CanFam3.1 (GCF_000002285.3) 9 NC_006591.3 (52615349..52631538, complement)

Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene Rap guanine nucleotide exchange factor 1 Neighboring gene uncharacterized LOC119873354 Neighboring gene uncharacterized LOC119873355 Neighboring gene small nucleolar RNA SNORD62 Neighboring gene uridine-cytidine kinase 1 Neighboring gene proline rich coiled-coil 2B Neighboring gene phospholipid phosphatase 7 (inactive)

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
protein O-mannosyl-transferase 1; LOW QUALITY PROTEIN: protein O-mannosyl-transferase 1
XP_005625279.1
XP_022279400.1
XP_022279402.1
XP_038343035.1
XP_038404902.1
XP_038404903.1
XP_038404904.1
XP_038404905.1
XP_038404906.1
XP_038404907.1
XP_038404908.1
XP_038404909.1
XP_038404910.1
XP_038404911.1
XP_038404912.1
XP_038468853.1
XP_038468854.1
XP_038468855.1
XP_038468856.1
XP_038468857.1
XP_038468858.1
XP_038468859.1
XP_038468860.1
XP_038468861.1
XP_038468862.1
XP_038468863.1
XP_038472657.1
XP_038472671.1
XP_038472689.1
XP_038472696.1
XP_038472700.1
XP_038472709.1
XP_038472718.1
XP_038472727.1
XP_038534160.1
XP_038534161.1
XP_038534162.1
XP_038534163.1
XP_038534164.1
XP_038534165.1
XP_038534166.1
XP_038534167.1
XP_038534168.1
XP_038534169.1
XP_038534170.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051813.1 Reference ROS_Cfam_1.0

    Range
    53517596..53535056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038678234.1XP_038534162.1  protein O-mannosyl-transferase 1 isoform X2

    Related
    ENSCAFP00845026431.1, ENSCAFT00845033767.1
    Conserved Domains (1) summary
    COG1928
    Location:14750
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  2. XM_038678235.1XP_038534163.1  protein O-mannosyl-transferase 1 isoform X3

    Conserved Domains (1) summary
    COG1928
    Location:14736
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  3. XM_038678232.1XP_038534160.1  protein O-mannosyl-transferase 1 isoform X1

    Conserved Domains (1) summary
    COG1928
    Location:14766
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  4. XM_038678233.1XP_038534161.1  protein O-mannosyl-transferase 1 isoform X1

    Conserved Domains (1) summary
    COG1928
    Location:14766
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  5. XM_038678241.1XP_038534169.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  6. XM_038678239.1XP_038534167.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  7. XM_038678238.1XP_038534166.1  protein O-mannosyl-transferase 1 isoform X5

    Related
    ENSCAFP00845026323.1, ENSCAFT00845033623.1
    Conserved Domains (1) summary
    COG1928
    Location:2696
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  8. XM_038678237.1XP_038534165.1  protein O-mannosyl-transferase 1 isoform X5

    Conserved Domains (1) summary
    COG1928
    Location:2696
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  9. XM_038678240.1XP_038534168.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  10. XM_038678236.1XP_038534164.1  protein O-mannosyl-transferase 1 isoform X4

    Conserved Domains (1) summary
    COG1928
    Location:14720
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  11. XM_038678242.1XP_038534170.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

RNA

  1. XR_005432672.1 RNA Sequence

  2. XR_005432671.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049269.1 Alternate UMICH_Zoey_3.1

    Range
    52297027..52312897 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038487107.1XP_038343035.1  LOW QUALITY PROTEIN: protein O-mannosyl-transferase 1 isoform X3

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

    Range
    52614407..52631871 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038612927.1XP_038468855.1  protein O-mannosyl-transferase 1 isoform X2

    Conserved Domains (1) summary
    COG1928
    Location:14750
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  2. XM_038612928.1XP_038468856.1  protein O-mannosyl-transferase 1 isoform X3

    Conserved Domains (1) summary
    COG1928
    Location:14736
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  3. XM_038612925.1XP_038468853.1  protein O-mannosyl-transferase 1 isoform X1

    Conserved Domains (1) summary
    COG1928
    Location:14766
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  4. XM_038612926.1XP_038468854.1  protein O-mannosyl-transferase 1 isoform X1

    Conserved Domains (1) summary
    COG1928
    Location:14766
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  5. XM_038612934.1XP_038468862.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  6. XM_038612932.1XP_038468860.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  7. XM_038612931.1XP_038468859.1  protein O-mannosyl-transferase 1 isoform X5

    Conserved Domains (1) summary
    COG1928
    Location:2696
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  8. XM_038612930.1XP_038468858.1  protein O-mannosyl-transferase 1 isoform X5

    Conserved Domains (1) summary
    COG1928
    Location:2696
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  9. XM_038612933.1XP_038468861.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  10. XM_038612929.1XP_038468857.1  protein O-mannosyl-transferase 1 isoform X4

    Conserved Domains (1) summary
    COG1928
    Location:14720
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  11. XM_038612935.1XP_038468863.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

RNA

  1. XR_005399334.1 RNA Sequence

  2. XR_005399333.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

    Range
    52708808..52726275 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038548976.1XP_038404904.1  protein O-mannosyl-transferase 1 isoform X2

    Conserved Domains (1) summary
    COG1928
    Location:14750
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  2. XM_038548977.1XP_038404905.1  protein O-mannosyl-transferase 1 isoform X3

    Conserved Domains (1) summary
    COG1928
    Location:14736
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  3. XM_038548974.1XP_038404902.1  protein O-mannosyl-transferase 1 isoform X1

    Conserved Domains (1) summary
    COG1928
    Location:14766
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  4. XM_038548975.1XP_038404903.1  protein O-mannosyl-transferase 1 isoform X1

    Conserved Domains (1) summary
    COG1928
    Location:14766
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  5. XM_038548983.1XP_038404911.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  6. XM_038548981.1XP_038404909.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  7. XM_038548980.1XP_038404908.1  protein O-mannosyl-transferase 1 isoform X5

    Conserved Domains (1) summary
    COG1928
    Location:2696
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  8. XM_038548979.1XP_038404907.1  protein O-mannosyl-transferase 1 isoform X5

    Conserved Domains (1) summary
    COG1928
    Location:2696
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  9. XM_038548982.1XP_038404910.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  10. XM_038548978.1XP_038404906.1  protein O-mannosyl-transferase 1 isoform X4

    Conserved Domains (1) summary
    COG1928
    Location:14720
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  11. XM_038548984.1XP_038404912.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

RNA

  1. XR_005364891.1 RNA Sequence

  2. XR_005364890.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    51882359..51899815 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038616743.1XP_038472671.1  protein O-mannosyl-transferase 1 isoform X2

    Conserved Domains (1) summary
    COG1928
    Location:14750
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  2. XM_005625222.4XP_005625279.1  protein O-mannosyl-transferase 1 isoform X3

    Conserved Domains (1) summary
    COG1928
    Location:14736
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  3. XM_022423692.2XP_022279400.1  protein O-mannosyl-transferase 1 isoform X1

    Conserved Domains (1) summary
    COG1928
    Location:14766
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  4. XM_038616729.1XP_038472657.1  protein O-mannosyl-transferase 1 isoform X1

    Conserved Domains (1) summary
    COG1928
    Location:14766
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  5. XM_038616790.1XP_038472718.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  6. XM_038616772.1XP_038472700.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  7. XM_038616768.1XP_038472696.1  protein O-mannosyl-transferase 1 isoform X5

    Conserved Domains (1) summary
    COG1928
    Location:2696
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  8. XM_038616761.1XP_038472689.1  protein O-mannosyl-transferase 1 isoform X5

    Conserved Domains (1) summary
    COG1928
    Location:2696
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  9. XM_038616781.1XP_038472709.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  10. XM_022423694.2XP_022279402.1  protein O-mannosyl-transferase 1 isoform X4

    Conserved Domains (1) summary
    COG1928
    Location:14720
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
  11. XM_038616799.1XP_038472727.1  protein O-mannosyl-transferase 1 isoform X6

    Conserved Domains (1) summary
    COG1928
    Location:2633
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]

RNA

  1. XR_005401469.1 RNA Sequence

  2. XR_005401466.1 RNA Sequence

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