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SLCO3A1 solute carrier organic anion transporter family member 3A1 [ Canis lupus familiaris (dog) ]

Gene ID: 608833, updated on 28-Sep-2021

Summary

Official Symbol
SLCO3A1provided by VGNC
Official Full Name
solute carrier organic anion transporter family member 3A1provided by VGNC
Primary source
VGNC:VGNC:46497
See related
EnsemblRapid:ENSCAFG00845002864
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See SLCO3A1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 3 NC_051807.1 (48346093..48649188, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 3 NC_006585.4 (50628974..50868877, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 3 NC_049224.1 (48420025..48723118, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 3 NC_049263.1 (47847277..48150531, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 3 NC_049744.1 (48078812..48381929, complement)
105 previous assembly CanFam3.1 (GCF_000002285.3) 3 NC_006585.3 (47927280..48233666, complement)

Chromosome 3 - NC_051807.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha-1A chain-like Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC106558611 Neighboring gene uncharacterized LOC119871201 Neighboring gene uncharacterized LOC119870801 Neighboring gene uncharacterized LOC111095210

Genomic regions, transcripts, and products

General gene information

Markers

Homology

General protein information

Preferred Names
solute carrier organic anion transporter family member 3A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051807.1 Reference ROS_Cfam_1.0

    Range
    48346093..48649188 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038660589.1XP_038516517.1  solute carrier organic anion transporter family member 3A1 isoform X1

    Related
    ENSCAFP00845004038.1, ENSCAFT00845005077.1
    Conserved Domains (1) summary
    cd17402
    Location:42566
    MFS_SLCO3_OATP3; Solute carrier organic anion transporter 3 family of the Major Facilitator Superfamily of transporters

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049263.1 Alternate UMICH_Zoey_3.1

    Range
    47847277..48150531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038471831.1XP_038327759.1  solute carrier organic anion transporter family member 3A1 isoform X1

    Conserved Domains (1) summary
    cd17402
    Location:39563
    MFS_SLCO3_OATP3; Solute carrier organic anion transporter 3 family of the Major Facilitator Superfamily of transporters
  2. XM_038471830.1XP_038327758.1  solute carrier organic anion transporter family member 3A1 isoform X2

    Conserved Domains (1) summary
    cd17402
    Location:39563
    MFS_SLCO3_OATP3; Solute carrier organic anion transporter 3 family of the Major Facilitator Superfamily of transporters

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049744.1 Alternate UNSW_CanFamBas_1.0

    Range
    48078812..48381929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038597068.1XP_038452996.1  solute carrier organic anion transporter family member 3A1 isoform X4

  2. XM_038597067.1XP_038452995.1  solute carrier organic anion transporter family member 3A1 isoform X3

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049224.1 Alternate UU_Cfam_GSD_1.0

    Range
    48420025..48723118 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038532752.1XP_038388680.1  solute carrier organic anion transporter family member 3A1 isoform X6

    Conserved Domains (1) summary
    cd17402
    Location:39563
    MFS_SLCO3_OATP3; Solute carrier organic anion transporter 3 family of the Major Facilitator Superfamily of transporters
  2. XM_038532751.1XP_038388679.1  solute carrier organic anion transporter family member 3A1 isoform X5

    Conserved Domains (1) summary
    cd17402
    Location:39563
    MFS_SLCO3_OATP3; Solute carrier organic anion transporter 3 family of the Major Facilitator Superfamily of transporters

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006585.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    50628974..50868877 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_845970.5XP_851063.2  solute carrier organic anion transporter family member 3A1 isoform X8

    UniProtKB/TrEMBL
    F1Q3M7
    Conserved Domains (1) summary
    cd17402
    Location:39563
    MFS_SLCO3_OATP3; Solute carrier organic anion transporter 3 family of the Major Facilitator Superfamily of transporters
  2. XM_003434373.4XP_003434421.1  solute carrier organic anion transporter family member 3A1 isoform X7

    Conserved Domains (1) summary
    cd17402
    Location:39563
    MFS_SLCO3_OATP3; Solute carrier organic anion transporter 3 family of the Major Facilitator Superfamily of transporters
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