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LHFPL2 LHFPL tetraspan subfamily member 2 [ Canis lupus familiaris (dog) ]

Gene ID: 610427, updated on 5-Mar-2024

Summary

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Official Symbol
LHFPL2provided by VGNC
Official Full Name
LHFPL tetraspan subfamily member 2provided by VGNC
Primary source
VGNC:VGNC:42658
See related
Ensembl:ENSCAFG00845008040
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 3 NC_051807.1 (28049631..28203008)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 3 NC_006585.4 (29367033..29520677)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 3 NC_049224.1 (28291124..28444925)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 3 NC_049263.1 (27985849..28139437)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 3 NC_049744.1 (27964071..28117601)

Chromosome 3 - NC_051807.1Genomic Context describing neighboring genes Neighboring gene arylsulfatase B Neighboring gene up-regulated during skeletal muscle growth 5 homolog (mouse) pseudogene Neighboring gene copine-1-like Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC119871173 Neighboring gene secretory carrier membrane protein 1 Neighboring gene uncharacterized LOC106558577

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LHFPL tetraspan subfamily member 2; LHFPL tetraspan subfamily member 2 protein
Names
lipoma HMGIC fusion partner-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051807.1 Reference ROS_Cfam_1.0

    Range
    28049631..28203008
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038660977.1 → XP_038516905.1  LHFPL tetraspan subfamily member 2 protein

    UniProtKB/TrEMBL
    A0A8C0NQN8, A0A8C0R8C2, A0A8I3N2E8
    Related
    ENSCAFP00845010983.1, ENSCAFT00845014168.1
    Conserved Domains (1) summary
    pfam10242
    Location:9 → 216
    L_HMGIC_fpl; Lipoma HMGIC fusion partner-like protein

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049263.1 Alternate UMICH_Zoey_3.1

    Range
    27985849..28139437
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038471553.1 → XP_038327481.1  LHFPL tetraspan subfamily member 2 protein

    Conserved Domains (1) summary
    pfam10242
    Location:9 → 216
    L_HMGIC_fpl; Lipoma HMGIC fusion partner-like protein

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049744.1 Alternate UNSW_CanFamBas_1.0

    Range
    27964071..28117601
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038596769.1 → XP_038452697.1  LHFPL tetraspan subfamily member 2 protein

    Conserved Domains (1) summary
    pfam10242
    Location:9 → 216
    L_HMGIC_fpl; Lipoma HMGIC fusion partner-like protein

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049224.1 Alternate UU_Cfam_GSD_1.0

    Range
    28291124..28444925
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038532483.1 → XP_038388411.1  LHFPL tetraspan subfamily member 2 protein

    UniProtKB/TrEMBL
    A0A8C0NQN8, A0A8C0R8C2, A0A8P0PG59
    Conserved Domains (1) summary
    pfam10242
    Location:9 → 214
    L_HMGIC_fpl; Lipoma HMGIC fusion partner-like protein

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006585.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    29367033..29520677
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038471762.1 → XP_038327690.1  LHFPL tetraspan subfamily member 2 protein

    UniProtKB/TrEMBL
    A0A8C0NQN8, A0A8C0R8C2, A0A8P0PG59
    Conserved Domains (1) summary
    pfam10242
    Location:9 → 214
    L_HMGIC_fpl; Lipoma HMGIC fusion partner-like protein
Nucleotide Protein
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