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DERL3 derlin 3 [ Bos taurus (cattle) ]

Gene ID: 614334, updated on 5-Mar-2024

Summary

Official Symbol
DERL3provided by VGNC
Official Full Name
derlin 3provided by VGNC
Primary source
VGNC:VGNC:28012
See related
BGD:BT14886; Ensembl:ENSBTAG00000022028
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

Location:
chromosome: 17
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 17 NC_037344.1 (71260778..71262858, complement)

Chromosome 17 - NC_037344.1Genomic Context describing neighboring genes Neighboring gene matrix metallopeptidase 11 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 Neighboring gene solute carrier family 2 member 11 Neighboring gene macrophage migration inhibitory factor

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037344.1 Chromosome 17 Reference ARS-UCD2.0 Primary Assembly

General gene information

Markers

Clone Names

  • MGC142482

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables misfolded protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables ubiquitin-specific protease binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of Hrd1p ubiquitin ligase ERAD-L complex IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
derlin-3
Names
Der1-like domain family, member 3
degradation in endoplasmic reticulum protein 3
der1-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076323.2NP_001069791.1  derlin-3

    See identical proteins and their annotated locations for NP_001069791.1

    Status: PROVISIONAL

    Source sequence(s)
    BC120164
    UniProtKB/Swiss-Prot
    Q0P5E4
    Conserved Domains (1) summary
    pfam04511
    Location:13202
    DER1; Der1-like family

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037344.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    71260778..71262858 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005218250.5XP_005218307.1  derlin-3 isoform X1

    Related
    ENSBTAP00000100341.1, ENSBTAT00000134944.1
    Conserved Domains (1) summary
    pfam04511
    Location:13201
    DER1; Der1-like family