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INIP INTS3 and NABP interacting protein [ Bos taurus (cattle) ]

Gene ID: 616784, updated on 22-Jun-2021

Summary

Official Symbol
INIPprovided by VGNC
Official Full Name
INTS3 and NABP interacting proteinprovided by VGNC
Primary source
VGNC:VGNC:30204
See related
BGD:BT12565; Ensembl:ENSBTAG00000019275
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
SSBIP1; C9orf80; C8H9orf80
Orthologs
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Genomic context

See INIP in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 8 NC_037335.1 (101961347..101990100, complement)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 8 AC_000165.1 (103669131..103695122, complement)

Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene hydroxysteroid dehydrogenase like 2 Neighboring gene KIAA1958 Neighboring gene 60S ribosomal protein L9 pseudogene Neighboring gene sorting nexin family member 30 Neighboring gene solute carrier family 46 member 2

Genomic regions, transcripts, and products

General gene information

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in DNA repair ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cellular response to DNA damage stimulus ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in response to ionizing radiation ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
part_of SOSS complex ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
SOSS complex subunit C
Names
SOSS-C
SSB-interacting protein 1
sensor of single-strand DNA complex subunit C
sensor of ssDNA subunit C
single-stranded DNA-binding protein-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001078064.2NP_001071532.1  SOSS complex subunit C

    See identical proteins and their annotated locations for NP_001071532.1

    Status: PROVISIONAL

    Source sequence(s)
    BC111656
    UniProtKB/Swiss-Prot
    Q2NKT2
    Related
    ENSBTAP00000025666.3, ENSBTAT00000025666.4
    Conserved Domains (1) summary
    pfam15925
    Location:18101
    SOSSC; SOSS complex subunit C

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037335.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    101961347..101990100 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024995949.1XP_024851717.1  SOSS complex subunit C isoform X2

    Conserved Domains (1) summary
    pfam15925
    Location:18101
    SOSSC; SOSS complex subunit C
  2. XM_024995948.1XP_024851716.1  SOSS complex subunit C isoform X1

    Conserved Domains (1) summary
    pfam15925
    Location:471
    SOSSC; SOSS complex subunit C
  3. XM_024995950.1XP_024851718.1  SOSS complex subunit C isoform X1

    Conserved Domains (1) summary
    pfam15925
    Location:471
    SOSSC; SOSS complex subunit C
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