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Rpl34-ps1 ribosomal protein L34, pseudogene 1 [ Mus musculus (house mouse) ]

Gene ID: 619547, updated on 23-Jun-2021

Summary

Official Symbol
Rpl34-ps1provided by MGI
Official Full Name
ribosomal protein L34, pseudogene 1provided by MGI
Primary source
MGI:MGI:3704270
See related
Ensembl:ENSMUSG00000068396
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm10239; EG619547
Annotation information
Note: It is unclear whether this locus is a functional gene or a pseudogene. However, the locus has transcript support and an intact open reading frame so it is represented as protein-coding in Gene and RefSeq. [03 Dec 2010]
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Genomic context

See Rpl34-ps1 in Genome Data Viewer
Location:
6; 6 C1
Exon count:
1
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (71101573..71101985)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (71124589..71125001)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (71074588..71074995)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23485 Neighboring gene predicted gene, 38826 Neighboring gene threonine synthase-like 2 (bacterial) Neighboring gene predicted gene, 30391

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

  • Homologs of the Rpl34-ps1 gene: The Rpl34-ps1 gene is conserved in Rhesus monkey, dog, cow, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs

Clone Names

  • MGC103270, MGC117759

General protein information

Preferred Names
ribosomal protein L34, pseudogene 1
Names
ribosomal protein L34 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001199350.1NP_001186279.1  ribosomal protein L34, pseudogene 1

    See identical proteins and their annotated locations for NP_001186279.1

    Status: PROVISIONAL

    Source sequence(s)
    BC100360
    UniProtKB/Swiss-Prot
    Q9D1R9
    Related
    ENSMUST00000121998.2
    Conserved Domains (1) summary
    pfam01199
    Location:196
    Ribosomal_L34e; Ribosomal protein L34e

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    71101573..71101985
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_005329.9: Suppressed sequence

    Description
    NG_005329.9: This RefSeq was permanently suppressed because it is now thought that this gene does encode a protein.
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