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SNORA4 small nucleolar RNA, H/ACA box 4 [ Homo sapiens (human) ]

Gene ID: 619568, updated on 10-Oct-2023

Summary

Official Symbol
SNORA4provided by HGNC
Official Full Name
small nucleolar RNA, H/ACA box 4provided by HGNC
Primary source
HGNC:HGNC:32587
See related
Ensembl:ENSG00000263776 AllianceGenome:HGNC:32587
Gene type
snoRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ACA4
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Genomic context

Location:
3q27.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (186787613..186787749)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (189609643..189609779)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (186505402..186505538)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene eukaryotic translation initiation factor 4A2 Neighboring gene microRNA 1248 Neighboring gene small nucleolar RNA, H/ACA box 81 Neighboring gene small nucleolar RNA, H/ACA box 63 Neighboring gene replication factor C subunit 4 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:186523827-186524438 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:186524439-186525050 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:186529516-186529618 Neighboring gene long intergenic non-protein coding RNA 2043

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • ACA4 small nucleolar RNA
  • ACA4 snoRNA

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002588.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AJ609452
    Related
    ENST00000584302.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    186787613..186787749
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    189609643..189609779
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)