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pb proboscipedia [ Tribolium castaneum (red flour beetle) ]

Gene ID: 641554, updated on 12-Apr-2024

Summary

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Gene symbol
pb
Gene description
proboscipedia
Primary source
BEETLEBASE:TC000925
Locus tag
TcasGA2_TC000925
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Tribolium castaneum
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
Also known as
Mxp
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Genomic context

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Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 4 NC_087397.1 (6671342..6692314, complement)
103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG2 NC_007417.3 (8542151..8563123)

Chromosome 4 - NC_087397.1Genomic Context describing neighboring genes Neighboring gene xiantuan Neighboring gene chaoptin Neighboring gene labial Neighboring gene uncharacterized LOC135265868 Neighboring gene uncharacterized LOC135265866

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proboscipedia represses distal signaling in the embryonic gnathal limb fields of Tribolium castaneum. DeCamillis M, et al. Dev Genes Evol, 2003 Mar. PMID 12632174
  2. Interactions of the Tribolium Sex combs reduced and proboscipedia orthologs in embryonic labial development. DeCamillis MA, et al. Genetics, 2001 Dec. PMID 11779803, Free PMC Article
  3. Maxillopedia is the Tribolium ortholog of proboscipedia. Shippy TD, et al. Evol Dev, 2000 May-Jun. PMID 11252570
  4. Analysis of maxillopedia expression pattern and larval cuticular phenotype in wild-type and mutant tribolium. Shippy TD, et al. Genetics, 2000 Jun. PMID 10835394, Free PMC Article
  5. Genetic analysis of the homeotic gene complex (HOM-C) in the beetle Tribolium castaneum. Beeman RW, et al. Dev Biol, 1989 May. PMID 2565268

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
maxillopedia
Names
AUGUSTUS-3.0.2_00925
GLEAN_00925
proboscipedia ortholog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001114335.1 → NP_001107807.1  maxillopedia

    See identical proteins and their annotated locations for NP_001107807.1

    Status: PROVISIONAL

    Source sequence(s)
    AF187068, AF187069
    UniProtKB/TrEMBL
    D6W944
    Conserved Domains (1) summary
    pfam00046
    Location:139 → 191
    Homeobox; Homeobox domain

RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference icTriCast1.1 Primary Assembly

Genomic

  1. NC_087397.1 Reference icTriCast1.1 Primary Assembly

    Range
    6671342..6692314 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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