Format

Send to:

Choose Destination

Slc5a4b solute carrier family 5 (neutral amino acid transporters, system A), member 4b [ Mus musculus (house mouse) ]

Gene ID: 64454, updated on 23-Jun-2021

Summary

Official Symbol
Slc5a4bprovided by MGI
Official Full Name
solute carrier family 5 (neutral amino acid transporters, system A), member 4bprovided by MGI
Primary source
MGI:MGI:1890478
See related
Ensembl:ENSMUSG00000020226
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
SA; pSG; SGLT; SAAT1; SGLT3b; pSGLT2; SGLT3-b; 2010104G07Rik
Expression
Biased expression in duodenum adult (RPKM 17.7), small intestine adult (RPKM 14.0) and 3 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Slc5a4b in Genome Data Viewer
Location:
10; 10 C1
Exon count:
18
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (75894452..75946852, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (76058618..76111018, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (75521366..75573763, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene 5134 Neighboring gene microRNA 6409 Neighboring gene zinc finger protein 280B Neighboring gene predicted gene 16222 Neighboring gene solute carrier family 5 (neutral amino acid transporters, system A), member 4b pseudogene Neighboring gene solute carrier family 5, member 4a

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General protein information

Preferred Names
solute carrier family 5 member 4b
Names
low affinity sodium-glucose cotransporter

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_023219.2NP_075708.2  solute carrier family 5 member 4b

    See identical proteins and their annotated locations for NP_075708.2

    Status: VALIDATED

    Source sequence(s)
    AC140851, AV259402, BC109133
    Consensus CDS
    CCDS48603.1
    UniProtKB/TrEMBL
    Q2VPB3, Q91ZP4
    Related
    ENSMUSP00000113582.2, ENSMUST00000120757.2
    Conserved Domains (1) summary
    cl00456
    Location:27660
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    75894452..75946852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011243522.1XP_011241824.1  solute carrier family 5 member 4b isoform X2

    Conserved Domains (1) summary
    cl00456
    Location:13511
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  2. XM_017314051.1XP_017169540.1  solute carrier family 5 member 4b isoform X3

    Conserved Domains (1) summary
    cl00456
    Location:1450
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
  3. XM_006513945.2XP_006514008.1  solute carrier family 5 member 4b isoform X1

    Conserved Domains (1) summary
    cl00456
    Location:22520
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Support Center